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scnpilot_solids1_trim150_scaffold_8846_6

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_47

partial RP 5 / 55 BSCG 8 / 51 ASCG 5 / 38
Location: comp(2775..3386)

Top 3 Functional Annotations

Value Algorithm Source
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 203.0
  • Bit_score: 406
  • Evalue 2.20e-110
Phosphomethylpyrimidine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZU1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 203.0
  • Bit_score: 406
  • Evalue 1.60e-110
thiC; Thiamine biosynthesis protein thiC; K03147 thiamine biosynthesis protein ThiC similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 216.0
  • Bit_score: 365
  • Evalue 1.30e-98

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGATCGAAGGGCCCGGCCATGTGCCGATGCACAAGATCAAGCTCAACATGGACAAGCAGTTGGAGCACTGCGCCGAGGCGCCGTTCTACACGCTGGGCCCGCTGACCACCGACATCGCACCGGGCTACGACCACATCACCTCGGGCATCGGCGCGGCGATGATCGGCTGGTTCGGCACCGCCATGCTCTGCTACGTCACGCCGAAGGAACATCTCGGCCTGCCGAATCGCGACGACGTCAAGACCGGCGTCATCACCTACAAGATCGCGGCGCACGCCGCCGACCTCGCCAAGGGCCACCCGGCCGCGCAGCGCCGCGACGACGCGCTGTCGCGCGCGCGCTTCGAATTCCGCTGGGAGGACCAGTTCAACCTGTCGCTCGATCCCGACACGGCGCGCGCCTACCACGACGCCACCCTGCCGAAGGAGGCGCACAAGACCGCGCATTTCTGCTCGATGTGCGGGCCGAAATTCTGCTCGATGCAGATCACCCAGGACCTGCGCCGCGAGGTGCGCGCGATGGAGGAGACCGCGCTGCGCGCCGGCATGGACGGCAAGTCGCGCGAGTTCGTCGAGCGCGGCGCCACGCTCTACGTGCCGACCGGGGAGTAG
PROTEIN sequence
Length: 204
MIEGPGHVPMHKIKLNMDKQLEHCAEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLPNRDDVKTGVITYKIAAHAADLAKGHPAAQRRDDALSRARFEFRWEDQFNLSLDPDTARAYHDATLPKEAHKTAHFCSMCGPKFCSMQITQDLRREVRAMEETALRAGMDGKSREFVERGATLYVPTGE*