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scnpilot_solids1_trim150_scaffold_8846

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_8846_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..267)
DNA (267bp) protein (89aa)
Thiamine biosynthesis protein ThiF n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZU6_9GAMM
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:EIL92737.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
UBA/THIF-type NAD/FAD binding protein
scnpilot_solids1_trim150_scaffold_8846_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(264..830)
DNA (567bp) protein (189aa)
Thiamine-phosphate synthase {ECO:0000256|RuleBase:RU003826}; EC=2.5.1.3 {ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|RuleBase:RU003826}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Thiamine-phosphate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZU5_9GAMM
thiE1; thiamine-phosphate pyrophosphorylase
scnpilot_solids1_trim150_scaffold_8846_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(827..1597)
DNA (771bp) protein (257aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Thiazole synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZU4_9GAMM
thiazole biosynthesis family protein; K03149 thiamine biosynthesis ThiG rbh
scnpilot_solids1_trim150_scaffold_8846_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1601..1798)
DNA (198bp) protein (66aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZU3_9GAMM
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EIL92734.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
thiS; thiamine biosynthesis protein ThiS
scnpilot_solids1_trim150_scaffold_8846_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1783..2769)
DNA (987bp) protein (329aa)
D-amino acid oxidase family protein; K03153 glycine oxidase [EC:1.4.3.19] rbh
Glycine oxidase ThiO n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZU2_9GAMM
Glycine oxidase ThiO {ECO:0000313|EMBL:EIL92733.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_8846_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2775..3386)
DNA (612bp) protein (204aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Phosphomethylpyrimidine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZU1_9GAMM
thiC; Thiamine biosynthesis protein thiC; K03147 thiamine biosynthesis protein ThiC
scnpilot_solids1_trim150_scaffold_8846_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3419..4606)
DNA (1188bp) protein (396aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Phosphomethylpyrimidine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZU1_9GAMM
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC
scnpilot_solids1_trim150_scaffold_8846_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5045..5479
DNA (435bp) protein (145aa)
RNA polymerase sigma factor RpoH n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ24_9GAMM
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
alternative sigma factor RpoH; K03089 RNA polymerase sigma-32 factor
Displaying 8 items

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