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scnpilot_solids1_trim150_scaffold_2190_5

Organism: SCNPILOT_SOLID_1_TRIM150_Alphaproteobacteria_62_14

partial RP 39 / 55 BSCG 36 / 51 ASCG 6 / 38
Location: comp(4271..5167)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Thalassospira lucentensis RepID=UPI0003B3AFA9 similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 291.0
  • Bit_score: 327
  • Evalue 1.00e-86
LysR family transcriptional regulator {ECO:0000313|EMBL:EKF09417.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 291.0
  • Bit_score: 326
  • Evalue 3.20e-86
transcriptional regulator, LysR family protein similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 298.0
  • Bit_score: 316
  • Evalue 1.30e-83

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Taxonomy

Thalassospira profundimaris → Thalassospira → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGGATTGGGACAAGCTGCGCATCTTTCATGCGGTCGCCTCGGCAGGAAGTTTCACCCATGCGGGGCAGATGCTGTCCCTCAGCCAGTCGGCGGTCAGCCGGCAGATCAGCGCGCTGGAAGATGAGCTTGTCACGCCGCTGTTTCAGCGCCACGCCCGCGGCCTGACCCTGACCGACGAAGGCGAACTGCTTTACGGCGCGGTCAGCGATGTGCTGACCCGCCTCTCCCAGGCCGAAGAAGCGCTGAAAAATGTGCAGGAAGCCCCGCGCGGCACCTTGAAGGTCACCACCAGCCACGGGCTTGGCACCTATTGGCTGCTGCCGCAGATCGAGAGCTTCCTCAAGAATTTTCAGGAAGTCGAGCTGCAACTGGTGTTCGAAGACCGCGAGCTTGATCTGGCGCAACGCGAGGCCGATGTGGCGCTGCGCATGCGGGCACCGATTCAGGCCGACCTCATCCAGCGCAAGCTGTTCAGCGTGCGCTATCACATCTACGCGTCACAGGCCTATCTCGACCGCGAAGGCGTGCCCGCAACATTCGACGATCTGATCAACCATCGCCTGATCGTCTACGGCGATACGGCGGCGCCGGAAATCCGCGAGGTCAACTGGCTGGTTGCCAGCACGCGGCGGCTGGGACGGAATGGCAACGGCGGCCGCACGCTGCGCATCAACAATTTCACCGGCATTCTGCACGCCGTGGAAGACGGCATGGGCCTTGGCGCCATTCCCGATTATGTTGCGGGACACCGGCCCGGCCTCGTCCGTGTTCTGCCCGATGTGGATGGCCCGACCTTCGATGTGCATCTGGTTTATTGTGACGCGCTGCGCCATTCCAAACGGGTTGGCGCCTTCCGCGACTTTCTCGTGCGCTGCGCCAAGGATTGGAAGTTCTAA
PROTEIN sequence
Length: 299
MDWDKLRIFHAVASAGSFTHAGQMLSLSQSAVSRQISALEDELVTPLFQRHARGLTLTDEGELLYGAVSDVLTRLSQAEEALKNVQEAPRGTLKVTTSHGLGTYWLLPQIESFLKNFQEVELQLVFEDRELDLAQREADVALRMRAPIQADLIQRKLFSVRYHIYASQAYLDREGVPATFDDLINHRLIVYGDTAAPEIREVNWLVASTRRLGRNGNGGRTLRINNFTGILHAVEDGMGLGAIPDYVAGHRPGLVRVLPDVDGPTFDVHLVYCDALRHSKRVGAFRDFLVRCAKDWKF*