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scnpilot_solids1_trim150_scaffold_1148_8

Organism: SCNPILOT_SOLID_1_TRIM150_Alphaproteobacteria_62_14

partial RP 39 / 55 BSCG 36 / 51 ASCG 6 / 38
Location: comp(12400..13035)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A61A0A similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 185.0
  • Bit_score: 210
  • Evalue 2.20e-51
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:EGF96839.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 201.0
  • Bit_score: 204
  • Evalue 1.70e-49
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 197.0
  • Bit_score: 197
  • Evalue 3.60e-48

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
GTGCGGACCGAACCTCACGCACCTGCGTCGTCTGAACGGCCTGAAGGCCCAGGCGACTTCAAATCGGAACTGCTGTCGCTGATTCCGTTTCTGCGCGCATTTGCCCGTTCGCTGTGCGGCAATCCCGAAATGGCCGACGATCTGGCACAGGAAGCCCTCGTCCGTGCCTGGCAATCGCGCGACAGTTTCGTCCCCGGCACCAATCTGAAAGCCTGGCTGTTCACGATCCTGCGCAACCAGTTCTATTCCGATCGCAGGCGCGCCTGGCGGCAGGCGCCGTGGGATCAGGAATCGGCGGAGCGTATTCCCGGCAGTGCACAGGATCAGAACTGGGCCGCGGATCTGAGCGATACCGCGCGCGCCTTGCGCAGCCTGTCCGATGAACAGCGCGAGGCGCTGATCCTGGTCGGTGCCGGTGGCTTTTCTTATGAGGAGGCGGCGGCGATCTGCCATTGCGCCGTCGGCACGGTGAAAAGCCGCGTGGCGCGGGCGCGCCGGGCTCTGATCAATATTCTGGACGGAGATCGTTCGCTGCACGCGGTCAAGCGGCCTGGCAATGGTCAGGCCGCAAAAGAGATCATGGAGCAGCTCGACCGGTTGACACCGGATCATTCCTCCAAGGATGAGAAAGACTGA
PROTEIN sequence
Length: 212
VRTEPHAPASSERPEGPGDFKSELLSLIPFLRAFARSLCGNPEMADDLAQEALVRAWQSRDSFVPGTNLKAWLFTILRNQFYSDRRRAWRQAPWDQESAERIPGSAQDQNWAADLSDTARALRSLSDEQREALILVGAGGFSYEEAAAICHCAVGTVKSRVARARRALINILDGDRSLHAVKRPGNGQAAKEIMEQLDRLTPDHSSKDEKD*