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scnpilot_solids1_trim150_scaffold_3417_1

Organism: SCNPILOT_SOLID_1_TRIM150_Alphaproteobacteria_62_14

partial RP 39 / 55 BSCG 36 / 51 ASCG 6 / 38
Location: comp(1..1386)

Top 3 Functional Annotations

Value Algorithm Source
pbpC; penicillin binding protein 1C; K05367 penicillin-binding protein 1C [EC:2.4.1.-] similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 455.0
  • Bit_score: 441
  • Evalue 4.10e-121
Penicillin-binding protein 1C n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGE5_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 462.0
  • Bit_score: 451
  • Evalue 1.30e-123
Penicillin-binding protein 1C {ECO:0000313|EMBL:EKS39819.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.9
  • Coverage: 462.0
  • Bit_score: 451
  • Evalue 1.80e-123

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1386
ATGAAGGCGTTCGCATGGCGCTGGCGAAAACTGCTGCTCGCGGTTGCGGGCGTTTTCTGCGCGCTCGTCATCGCCAATTTTCTGTTCCCGCCGGACATGACGCGGGTGCAGTTGCGCTCGACCGAGGTGCTGGACCGTCATGGCGAATTGCTGCGGCCGTTCCTCTCCAGGGATGGTTATTGGCGGCTGAAGACCACGGCGGCGGACGTCGATCCGCGTTACCTCATCCTGCTCAAGGCCTATGAGGACAAGCGTTTCGATTCCCATCCCGGCGTCGATCCGCTGGCGCTGGCGCGCGCGGCCTGGCAATGGGCGGTGCGCGGCCATGTGGTGTCCGGTGCCTCCACCCTCACCATGCAGGTGGCCCGTCTTTTGGAGCCGGGGCGCCCGCGCACCGTGCCGACGAAATTCATCCAGATGGTGCGCGCCGTTCAACTGGAGCTGCGCTATTCCAAGGATGACATTCTTTCCTTTTATCTGACGCTCGCGCCGTTCGGCGGCAATCTCGAAGGGGTGCGCGCTGCCTCGCTCGCCTATTTCGGCAAGGAGCCGCGTTCGCTTTCACTCTCCCAATCCGCATTGCTGGTGGCCTTGCCGCAGTCGCCGGAGCGTCAGCGCCCCGATCGCCATCCCAAAGCGGCAAAGGCGGCGCGCGATCATGTGCTGGCGCGCATGGTGGAAGATGGCGTGGTCGCAAAAACGGATGCCGCTGTCGCGCTGCGCGATGCACCGCCTGCGGCCCGCCTTGCCATGCCGTTTGCCGCGCCGCATCTGGCGCAATTCCTGGCCGCGAAACATCCGGGCGAACGCATCCGCACCACCCTCGATGGGGGAATGCAGCGCGCGGCCGAACGGCTTGCGGCGCGCGAACATCTTTATATGGATGATGGTGCCAGCCTCGCCATCGTGGTGGCGGAGAACAAAAGTCATGCCGTGCGCGCCTATGTCGGCGGCACCGATTATTGGGGCAAGGCGGGCATGCTCGATCTGGCGCAGCGTACGCGCTCGCCCGGTTCCGCACTCAAGCCTTTCATCTATGGTCTCGCGTTTGACGATCTGGCGCTTCATCCCGCCACGTTGATGCAGGATCAGGCGACCAATTTCGGCGACTATGCGCCGCGCGATTTCGACGGCGAATTTCAGGGCGCGGTCACCGCGGGCAGCGCACTGCGCATGTCGCTGAATGTGCCGGCGGTGATGGTGCTTGAACGTATCGGGCCCTTGCGTTTCACCCAGACGCTGGAAAATGCCGGCGCACATCTCGCCTTTCCCACGCGTGATACGGTGCCCAGCCTGCCGGTGGCGCTTGGTGGCCTCGGCATCAGCCTGGCCGATCTCACCATGCTTTATACCGGCATTGCCGATGGCGGCACGGTGGCGCCGTTG
PROTEIN sequence
Length: 462
MKAFAWRWRKLLLAVAGVFCALVIANFLFPPDMTRVQLRSTEVLDRHGELLRPFLSRDGYWRLKTTAADVDPRYLILLKAYEDKRFDSHPGVDPLALARAAWQWAVRGHVVSGASTLTMQVARLLEPGRPRTVPTKFIQMVRAVQLELRYSKDDILSFYLTLAPFGGNLEGVRAASLAYFGKEPRSLSLSQSALLVALPQSPERQRPDRHPKAAKAARDHVLARMVEDGVVAKTDAAVALRDAPPAARLAMPFAAPHLAQFLAAKHPGERIRTTLDGGMQRAAERLAAREHLYMDDGASLAIVVAENKSHAVRAYVGGTDYWGKAGMLDLAQRTRSPGSALKPFIYGLAFDDLALHPATLMQDQATNFGDYAPRDFDGEFQGAVTAGSALRMSLNVPAVMVLERIGPLRFTQTLENAGAHLAFPTRDTVPSLPVALGGLGISLADLTMLYTGIADGGTVAPL