ggKbase home page

scnpilot_solids1_trim150_scaffold_3304_5

Organism: SCNPILOT_SOLID_1_TRIM150_Alphaproteobacteria_62_14

partial RP 39 / 55 BSCG 36 / 51 ASCG 6 / 38
Location: comp(5066..5659)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SAX5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 193.0
  • Bit_score: 217
  • Evalue 1.30e-53
hypothetical protein; K07735 putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 199.0
  • Bit_score: 217
  • Evalue 5.40e-54
UPF0301 protein W911_05510 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 193.0
  • Bit_score: 217
  • Evalue 1.80e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGGCGATGCAAGGCATCACGGTGGAAGACGGCGGCGAAAGTTTTCTGGAGGGAAAACTGCTGATCGCACTTCCCGGTATGCCGGACCCACGCTTTGAACGCAGCGTGATCTTCATCTGCGCCCATTCCGGCCAGGGGGCCATGGGCCTGATCATCAACAAGGCGGTTGAGGGCCTGAACTTTCACGACATGATGGAACGCCTGGATGTCGAGGTCTCGGCGATGACACCGGACCCGCCAATCCTGTTCGGCGGACCGATGCAGACAGAGCGCGGCTTCGTTCTGCACAGTGGAGATTTCGAAAGCGGCGATTCCACGCTGCCGGTTACGAGGGAGGTATCGCTGACCGCAACGCTGGACATTCTGCGTGCCATCGCATCCGGGCAAGGGCCGCAGCGCTCTTTGTTCGCACTGGGCTATGCGGGCTGGAGCGGCGGACAGATCGAAGATGAAATCCGCGCCAATGGCTGGATCCACTGTGACGCCGACATGGGGCTGGTTTTCGACACCAGCCTCGATGCGAAATGGGGCGAAGCGCTCAGAAAACTCGGAATCGACGCATCCAGCCTGTCAGCCAATACCGGGAGCGCCTGA
PROTEIN sequence
Length: 198
MAMQGITVEDGGESFLEGKLLIALPGMPDPRFERSVIFICAHSGQGAMGLIINKAVEGLNFHDMMERLDVEVSAMTPDPPILFGGPMQTERGFVLHSGDFESGDSTLPVTREVSLTATLDILRAIASGQGPQRSLFALGYAGWSGGQIEDEIRANGWIHCDADMGLVFDTSLDAKWGEALRKLGIDASSLSANTGSA*