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scnpilot_solids1_trim150_scaffold_3826_2

Organism: SCNPILOT_SOLID_1_TRIM150_Alphaproteobacteria_62_14

partial RP 39 / 55 BSCG 36 / 51 ASCG 6 / 38
Location: comp(221..919)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, HxlR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4T3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 65.7
  • Coverage: 233.0
  • Bit_score: 314
  • Evalue 9.20e-83
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EFI52963.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 233.0
  • Bit_score: 314
  • Evalue 1.30e-82
helix-turn-helix hxlr type similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 232.0
  • Bit_score: 299
  • Evalue 7.40e-79

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGTCGGACAGCAGCTACAATCAATTCTGCCCCGTCGCCATGGCCGCGGAGATCGTCTGCTCCCGCTGGACGTTGCTCGTCCTGCGCGAACTCATCCTGGGAGCAACCCGCTTCAACGAATTGCGGCGCGGCTTGCCCAGCATGTCTCCCGCCCTGCTCTCCAAACGCCTGAAGGATTTGGAAGCGGCGGGGATCGTCACGCGGAACGCCATCGCACGCGAACCCGCCGTGCAGGAGTATCGCTTGACCGAGGCCGGCCGCGAGTTGCGCCCGATCATCGAGGCGGTCGGCGTGTGGGGCAAACGGTGGGTCACAACGGAGGCGACGCTGAGGAATCTCGATGCCAGTCTGCTGATGTGGGACATCAAGCGGAACATCGACACGGACCCCATGCCGCGCCGGCGCAGCACCATACAGTTCATCTTCAGCGAGCAGCCCCAATCGGAGCGCAATTATTGGCTCGTCGTCGATCCGGATGCGGAGGTGGATTTGTGCACCATCGATCCAGGCTTCGATGTAGATCTCTACGTATCGACCGACTTAAGAACGATGACCGAAATCTGGCTGGGTTATTGCGCCGTCAGCCAGGTATCCGAGGATGGCAGGCTTGTCCTGACGGGAAGCAGCGAACTGGCCCGCGACCTGCGAGCTTGGCTGAAACTCAGCGTGTTCGCAAAAGTCGAGAAGAAGGTGGCTTAG
PROTEIN sequence
Length: 233
MSDSSYNQFCPVAMAAEIVCSRWTLLVLRELILGATRFNELRRGLPSMSPALLSKRLKDLEAAGIVTRNAIAREPAVQEYRLTEAGRELRPIIEAVGVWGKRWVTTEATLRNLDASLLMWDIKRNIDTDPMPRRRSTIQFIFSEQPQSERNYWLVVDPDAEVDLCTIDPGFDVDLYVSTDLRTMTEIWLGYCAVSQVSEDGRLVLTGSSELARDLRAWLKLSVFAKVEKKVA*