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scnpilot_solids1_trim150_scaffold_4684_4

Organism: SCNPILOT_SOLID_1_TRIM150_Alphaproteobacteria_62_14

partial RP 39 / 55 BSCG 36 / 51 ASCG 6 / 38
Location: 3438..3722

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit beta n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=IHFB_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 93.0
  • Bit_score: 143
  • Evalue 8.80e-32
integration host factor subunit beta; K05788 integration host factor subunit beta similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 93.0
  • Bit_score: 143
  • Evalue 2.80e-32
Integration host factor subunit beta {ECO:0000255|HAMAP-Rule:MF_00381}; Short=IHF-beta {ECO:0000255|HAMAP-Rule:MF_00381};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 93.0
  • Bit_score: 143
  • Evalue 1.20e-31

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGATCAAATCCGAATTGGTTGCCAAGCTGACACAGCGTTATCCACATCTCTATCACCGCGATGTGGAACGGATCGTGTCCACTGTGCTGGATAAGATTACGGAATCTCTTGCCTCTGGCCATCGTGTGGAACTGCGTGGTTTCGGTGCTTTTTCGGTCAAGGTGCGGCCTGCGCGTCAGGGCCGCAATCCGCGCACGGGCGAACCCGTAACGGTCGAAGAAAAGCGCGCGCCCTTCTTTCGCACCGGCAAGGAATTGCGGGAGCGGTTGAACACCGGCAAGTAA
PROTEIN sequence
Length: 95
MIKSELVAKLTQRYPHLYHRDVERIVSTVLDKITESLASGHRVELRGFGAFSVKVRPARQGRNPRTGEPVTVEEKRAPFFRTGKELRERLNTGK*