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scnpilot_solids1_trim150_scaffold_4485_3

Organism: SCNPILOT_SOLID_1_TRIM150_Alphaproteobacteria_62_14

partial RP 39 / 55 BSCG 36 / 51 ASCG 6 / 38
Location: comp(2141..5227)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 999.99
  • Bit_score: 1338
  • Evalue 0.0
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 999.99
  • Bit_score: 1336
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXQ5_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 999.99
  • Bit_score: 1336
  • Evalue 0.0

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Taxonomy

alpha proteobacterium MA2 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3087
AAGGATGTGGACCGCGATGCGCTGATCGTGTTTCTCGCCCGCAATGGCTACACCCGCGCCAGCACGGTGCGTGAACCTGGCGATTACGCGCTGCGCGGCGGCATTGTCGATCTGTGGCCGCCGGGTGAGGAAGCGCCGCTGCGGCTGGATTTTTTCGGCAGCGGGCTTGAAACCATCCGCCGCTTCGATGCCGAAACCCAGTTGTCGCGCGATACGGTTTCCGGAATCGAATTGCTGCCGGCCAGCGAAGCCCCGCTCGATCGCCAATCCATCAGCCTCTTCCGCGAAGGCTATGTTGCCACCTTCGGTCCGGCGGGACATGACGATCCGCTTTATGAATCGGTCAGCGCTGGCCGCAAACATCAGGGGATGGAGCATTGGCTGCCGCTGTTCTATTCCCACCTCGATACGCTGTTCGACTACGCGCCGCGTGCGCTGGTGTTTCTGTCGCATCAGGCGGTGGAGGCGAAGGACGCTCGCCTGTCCCTGATCACCGACTATTACGAAACCCGCGAACAGATGCGGCGCAGCGCCTATGATAGCAAGAACCCGATCAAGGGGGCGCCTTACAAGCCGCTGCCGCCGGACCGGCTCTATCTTTCCGGTGCGGAATGGGACGAACGGCTCGCCAAGCATCCCTTGCGCCAGCTTTCGCCGTTCCATGCGCCGGAAAGCAAAAAATCGCTCGATGCTGGCGGCAAGGCGGGGCGCGATTTCGCGCCCGAACGCGCGCAAGGCCGCGTCAATGTCTTTGAAGCGGCGGCGAAACATGTGAAGGCGTTGCAGGCGGCGGGCACGCGCGTCGTGCTCACCGCCTGGACCGAAGGCTCGGCGGAGCGGTTGGGCGGTGTTCTGGCCGACCATGGTCTCGGGCCTGCGCGCGCCGTTTCCGGCTGGGCCGATGTGCAGACCCTGCACAAGGGCGCTGTGGGCATTGCCGTTCTGGGTCTGGAGCATGGCTTTGAGACGCCGGATTTCGCCATTGTCGCGGAACAGGACATCCTCGGCGACCGCATGGTCCGTGCACGGACCAAAACGCGCAAGGCGCAGAATTTCTTGCAGGAAGCCTCAAGCCTCGCGCCCGGCGATCTCGTCACCCACATCGAACACGGCATCGGCCGTTATCTGGGGCTCAAGACACTCGATGTTGCGGGCGCGCCGCATGATTGCCTGGCGCTGCAATATGACGGCGGCAAGCTGTTCCTGCCGGTGGAGAATATCGAACTTCTAACGCGCTATGGCGCCGATGAAGGCACGGCCCAGCTTGACCGGCTTGGCGGCGCCGGCTGGCAGCAGCGCAAAGCCCGCATGAAGGAGCGCGTGCGCGAAATCGCGGCCGAGCTGATTGCGATTGCCGCCGCGCGCGAATTGAAAACACTTCCGGCGATTGAAGCGCCGCAAGGGCTTTATGACGAATTCTGCGCCCGCTTCCCCTATCAGGAGACGGAGGATCAGGAAAAAGCCATTGCCGATGTGGTGTCCGACCTCGCCCACGGCCGGCCGATGGATCGCCTTGTCTGCGGCGATGTCGGATTCGGCAAAACCGAAGTGGCCTTGCGCGCGGCCTTTGTGGTGGCGATGTCGGGGGAACAGGTCGCCGTGGTGGCACCCACCACGCTGCTCGCCCGCCAGCACGCGCGCAATTTCGCCGAACGGTTTCAGGGTTTCCCGATCAAGGTGCGGCAATTGTCGCGTTTCGTCGATGCGAAGGAAGCACGCGAAACCAAGGCCGGCCTTGCTTCGGGCGATGTGAATATCGTGGTGGGCACGCATGCGTTGCTTGCGAAGTCGATCAGCTTCTCCAATCTTGGCCTCGTCATCGTCGATGAAGAACAACATTTCGGTGTCACCCATAAGGAACGGCTGAAATCGTTGAAGGCCGACGTGCATGTGCTGACCCTGACGGCGACGCCCATTCCACGCACCTTGCAACTGGCGCTTTCCGGTGTGCGCGATCTCTCGCTGATCACCACGCCGCCGATCGACCGGCTGGCGGTGCGCACCTTCATCACACCATTCGATCCCCTGGTGCTGCGTGAGGCGCTGCTGCGCGAACATTATCGCGGCGGGCAAAGTTTCTATGTCTGCCCGCGCATCGCCGATCTGCGCGATGCCGAACAATTCCTGAAAGACACGGTGCCGGAGGTGAAGGCCGCCGTCGCCCATGGCCAGATGTCGGCCACCCATCTGGAGGAGGTGATGACCGCCTTCTACGAACGTCAGGTGGATGTGCTGATCTCGACCAACATCGTTGAAAGCGGGCTGGACATTCCAACCGCCAACACCCTTCTCGTGCATCGCGCCGATATGTTCGGCTTGGCCCAGCTTTATCAATTGCGTGGCCGCATCGGGCGGGCCAAACAGCGGGCTTACGCCTATCTGACCACGCCGGCCGAACGCAAACTGACCGAGGCGGCGGAGCGGCGGCTGCAGGTGCTGCAATCGCTGGATCAACTGGGTGCCGGTTTTTCGGTCGCCAGCCACGATCTCGATATCCGCGGCGCCGGCAATCTTCTGGGCGAAGAACAATCCGGCCATGTCCGCGAAGTGGGCATCGAGCTTTATCAGGAAATGCTGGAAGAAGCCGTTTCGCAGATGCGCGCGGGTGGCACGGGTGATGATCTGCCGGATGAATGGTCGCCGCAGATCAATATCGGCGCGGCCGTGCTCATTCCGGAATCCTATGTCGCCGACCTCAATGTGCGCATGGCGCTTTACCGCCGCCTCGCCGGGGTGGAAGGCCGGGCGGAGATCGATCGTTTCGCCGCCGAACTGATCGACCGTTTCGGCCCCCTGCCGGATGAGGTGAAGCATCTCTTGGAAATCGTCGCGATCAAGCATCTCTGCCGCATCGCGCTGGTGGAAAAGATCGAGGCCGGGCCGAAGGGCGCCACCTTGAGCTTCCGCAACAATCTGTTCCCCAATCCGGTGGCACTTGTGCGCCTGATCAATGCGCATCAGAAAACCATGAAGGTGCGCCCGGATCAGAAGGTGGTCATCACCCGCGACTGGCCCGCGCCGGAACAGCGGCTGAAGGGTGTTCAGGCTTTGCTGACCCAGCTTTCCCAACTGGCGGAAGCGGCCTAG
PROTEIN sequence
Length: 1029
KDVDRDALIVFLARNGYTRASTVREPGDYALRGGIVDLWPPGEEAPLRLDFFGSGLETIRRFDAETQLSRDTVSGIELLPASEAPLDRQSISLFREGYVATFGPAGHDDPLYESVSAGRKHQGMEHWLPLFYSHLDTLFDYAPRALVFLSHQAVEAKDARLSLITDYYETREQMRRSAYDSKNPIKGAPYKPLPPDRLYLSGAEWDERLAKHPLRQLSPFHAPESKKSLDAGGKAGRDFAPERAQGRVNVFEAAAKHVKALQAAGTRVVLTAWTEGSAERLGGVLADHGLGPARAVSGWADVQTLHKGAVGIAVLGLEHGFETPDFAIVAEQDILGDRMVRARTKTRKAQNFLQEASSLAPGDLVTHIEHGIGRYLGLKTLDVAGAPHDCLALQYDGGKLFLPVENIELLTRYGADEGTAQLDRLGGAGWQQRKARMKERVREIAAELIAIAAARELKTLPAIEAPQGLYDEFCARFPYQETEDQEKAIADVVSDLAHGRPMDRLVCGDVGFGKTEVALRAAFVVAMSGEQVAVVAPTTLLARQHARNFAERFQGFPIKVRQLSRFVDAKEARETKAGLASGDVNIVVGTHALLAKSISFSNLGLVIVDEEQHFGVTHKERLKSLKADVHVLTLTATPIPRTLQLALSGVRDLSLITTPPIDRLAVRTFITPFDPLVLREALLREHYRGGQSFYVCPRIADLRDAEQFLKDTVPEVKAAVAHGQMSATHLEEVMTAFYERQVDVLISTNIVESGLDIPTANTLLVHRADMFGLAQLYQLRGRIGRAKQRAYAYLTTPAERKLTEAAERRLQVLQSLDQLGAGFSVASHDLDIRGAGNLLGEEQSGHVREVGIELYQEMLEEAVSQMRAGGTGDDLPDEWSPQINIGAAVLIPESYVADLNVRMALYRRLAGVEGRAEIDRFAAELIDRFGPLPDEVKHLLEIVAIKHLCRIALVEKIEAGPKGATLSFRNNLFPNPVALVRLINAHQKTMKVRPDQKVVITRDWPAPEQRLKGVQALLTQLSQLAEAA*