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scnpilot_solids1_trim150_scaffold_4490_6

Organism: SCNPILOT_SOLID_1_TRIM150_Alphaproteobacteria_62_14

partial RP 39 / 55 BSCG 36 / 51 ASCG 6 / 38
Location: comp(4794..5222)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S5 n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3HZU1_RHOVT similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 144.0
  • Bit_score: 221
  • Evalue 5.00e-55
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 144.0
  • Bit_score: 221
  • Evalue 1.60e-55
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 144.0
  • Bit_score: 221
  • Evalue 7.00e-55

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Taxonomy

Rhodomicrobium vannielii → Rhodomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
GGCGATCAGCGTGGCCGGGTCGGTTTCGGCCATGGCAAGGCGCGTGAGGTGCCGGAAGCCATTCGCAAGGCGACCGATGCCGCCAAGCGCGCGCTGATCCGCGTGCCGCTGAAGGATGGGCGCACCCTGCATCATGAAACCCGCGGTCATCATGGCGCGGGCAAGGTTCTGGTCCGTCCGGCCCCGGCCGGTACCGGCATCATCGCCGGCGGCCCGATGCGCGCGGTGTTTGAATCGCTGGGCGTTGGCGATGTGGTCGCCAAATCGCTCGGCACCTCGAACCCGTATAATATGGTGCGTGCCACCTTCGATGCCCTGAAGTCGCAGCAAAGCCCGCGCATGATCGCGCAGCGCCGCGGCCGCAGCGTCAGCGAAATCATTTCCCGCCGCGAAGGCCAGAAGGGCGAACAGGCGCCAGCAGGAAGCTAA
PROTEIN sequence
Length: 143
GDQRGRVGFGHGKAREVPEAIRKATDAAKRALIRVPLKDGRTLHHETRGHHGAGKVLVRPAPAGTGIIAGGPMRAVFESLGVGDVVAKSLGTSNPYNMVRATFDALKSQQSPRMIAQRRGRSVSEIISRREGQKGEQAPAGS*