ggKbase home page

scnpilot_solids1_trim150_scaffold_4501

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4501_1
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..808)
DNA (807bp) protein (269aa)
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein id=12492982 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
Tax=RBG_16_Gamma2_64_11_curated
scnpilot_solids1_trim150_scaffold_4501_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(852..1334)
DNA (483bp) protein (161aa)
signal peptide protein id=12492983 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
signal peptide protein
Possible signal peptide protein {ECO:0000313|EMBL:AAZ96861.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_solids1_trim150_scaffold_4501_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1331..2554)
DNA (1224bp) protein (408aa)
BNR repeat-containing protein id=12492984 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Putative signal peptide protein {ECO:0000313|EMBL:CCU62360.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
BNR repeat-containing protein
scnpilot_solids1_trim150_scaffold_4501_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2738..3517)
DNA (780bp) protein (260aa)
dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15] id=12492985 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15]
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_4501_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3568..4107)
DNA (540bp) protein (180aa)
Phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] id=12492986 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_4501_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4104..4904)
DNA (801bp) protein (267aa)
formylmethanofuran dehydrogenase subunit C (EC:1.2.99.5); K00202 formylmethanofuran dehydrogenase subunit C [EC:1.2.99.5] id=12492987 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
formylmethanofuran dehydrogenase subunit C (EC:1.2.99.5); K00202 formylmethanofuran dehydrogenase subunit C [EC:1.2.99.5]
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_4501_7
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4901..5737)
DNA (837bp) protein (279aa)
formylmethanofuran--tetrahydromethanopterin formyltransferase (EC:2.3.1.101); K00672 formylmethanofuran--tetrahydromethanopterin N-formyltransferase [EC:2.3.1.101] id=12492988 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
formylmethanofuran--tetrahydromethanopterin formyltransferase (EC:2.3.1.101); K00672 formylmethanofuran--tetrahydromethanopterin N-formyltransferase [EC:2.3.1.101]
Formylmethanofuran--tetrahydromethanopterin formyltransferase; EC=2.3.1.101;; H4MPT formyltransferase; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
scnpilot_solids1_trim150_scaffold_4501_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5734..7398)
DNA (1665bp) protein (555aa)
formylmethanofurane dehydrogenase subunit A; K00200 formylmethanofuran dehydrogenase subunit A [EC:1.2.99.5] id=12492989 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
formylmethanofurane dehydrogenase subunit A; K00200 formylmethanofuran dehydrogenase subunit A [EC:1.2.99.5] rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_4501_9
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7385..8686)
DNA (1302bp) protein (434aa)
formylmethanofuran dehydrogenase (EC:1.2.99.5); K00201 formylmethanofuran dehydrogenase subunit B [EC:1.2.99.5] id=12492990 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
formylmethanofuran dehydrogenase (EC:1.2.99.5); K00201 formylmethanofuran dehydrogenase subunit B [EC:1.2.99.5] rbh
Tax=BJP_S1_SUB10_Methylophilales_55_32
scnpilot_solids1_trim150_scaffold_4501_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8971..9903
DNA (933bp) protein (311aa)
beta-ribofuranosylaminobenzene 5'-phosphate synthase family protein id=12492991 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
beta-ribofuranosylaminobenzene 5'-phosphate synthase family protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_4501_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9926..10144
DNA (219bp) protein (73aa)
mtdB; methylene tetrahydromethanopterin dehydrogenase MtdB (EC:1.5.1.-); K10714 methylene-tetrahydromethanopterin dehydrogenase [EC:1.5.1.-] id=12492992 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
mtdB; methylene tetrahydromethanopterin dehydrogenase MtdB (EC:1.5.1.-); K10714 methylene-tetrahydromethanopterin dehydrogenase [EC:1.5.1.-]
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 11 items

View Taxonomy