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scnpilot_solids1_trim150_scaffold_1480

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1480_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..558)
DNA (558bp) protein (186aa)
uroporphyrinogen decarboxylase HemE (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37]
uroporphyrinogen decarboxylase n=1 Tax=Thiobacillus denitrificans RepID=UPI000374737F
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_1480_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(513..1067)
DNA (555bp) protein (185aa)
uroporphyrinogen decarboxylase HemE (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] id=12494832 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
uroporphyrinogen decarboxylase HemE (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37]
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_1480_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1432..2589
DNA (1158bp) protein (386aa)
putative transporter protein; K06076 long-chain fatty acid transport protein id=12494831 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
putative transporter protein; K06076 long-chain fatty acid transport protein rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_1480_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2678..2848)
DNA (171bp) protein (57aa)
id=12494830 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_1480_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2912..3391)
DNA (480bp) protein (160aa)
transport-associated id=12494829 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
transport-associated
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_1480_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3435..3749)
DNA (315bp) protein (105aa)
hypothetical protein id=12494828 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_1480_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4037..4204)
DNA (168bp) protein (56aa)
membrane protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036D294D
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_1480_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4364..5716)
DNA (1353bp) protein (451aa)
response regulator n=1 Tax=Thiobacillus thioparus RepID=UPI00036BFD4F rbh
two component Fis family transcriptional regulator; K07715 two-component system, NtrC family, response regulator GlrR
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_1480_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5713..6192)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000371EE9F
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_1480_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6208..7587)
DNA (1380bp) protein (460aa)
signal transduction histidine kinase (EC:2.7.3.-); K07711 two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037E607A rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids1_trim150_scaffold_1480_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7728..9176)
DNA (1449bp) protein (483aa)
gltD; glutamate synthase subunit beta (EC:1.4.1.13); K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14] rbh
glutamate synthase subunit beta n=1 Tax=Thiobacillus thioparus RepID=UPI00035FEFC7 rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_1480_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9179..13285)
DNA (4107bp) protein (1369aa)
gltB; glutamate synthase subunit alpha (EC:1.4.1.13); K00265 glutamate synthase (NADPH/NADH) large chain [EC:1.4.1.13 1.4.1.14]
Glutamate synthase large subunit {ECO:0000313|EMBL:AAZ98720.1}; EC=1.4.7.1 {ECO:0000313|EMBL:AAZ98720.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
glutamate synthase subunit alpha n=1 Tax=Thiobacillus thioparus RepID=UPI00037776CE
Displaying 12 items

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