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scnpilot_solids1_trim150_scaffold_2881

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2881_1
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..610
DNA (609bp) protein (203aa)
Twitching motility protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WUB4_PSEUU
Twitching motility protein PilT {ECO:0000313|EMBL:KGQ17776.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
twitching motility protein; K02670 twitching motility protein PilU
scnpilot_solids1_trim150_scaffold_2881_2
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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654..1220
DNA (567bp) protein (189aa)
UPF0301 protein XALC_2157 n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UEP4_XANAP
UPF0301 protein LF41_1982 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein; K07735 putative transcriptional regulator
scnpilot_solids1_trim150_scaffold_2881_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1217..1693
DNA (477bp) protein (159aa)
Holliday junction resolvase-like protein; K07447 putative holliday junction resolvase [EC:3.1.-.-]
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
Putative Holliday junction resolvase n=2 Tax=Stenotrophomonas maltophilia RepID=M5TPL3_STEMA
scnpilot_solids1_trim150_scaffold_2881_4
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1725..2660
DNA (936bp) protein (312aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
aspartate carbamoyltransferase n=1 Tax=Xanthomonas RepID=UPI000381B3AE
scnpilot_solids1_trim150_scaffold_2881_5
unknown

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comp(2662..3171)
DNA (510bp) protein (170aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2881_6
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3266..4627)
DNA (1362bp) protein (454aa)
Magnesium transporter n=4 Tax=Stenotrophomonas maltophilia RepID=J7VMA9_STEMA
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
putative MgtE/divalent cation transmembrane transporter protein; K06213 magnesium transporter
scnpilot_solids1_trim150_scaffold_2881_7
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4802..6523)
DNA (1722bp) protein (574aa)
phosphotransferase system enzyme I; K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9]
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UQN8_PSEUP
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_2881_8
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6523..6792)
DNA (270bp) protein (90aa)
phosphocarrier protein HPr n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DB10AF
Phosphocarrier protein HPr {ECO:0000313|EMBL:KGO98812.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
phosphotransferase system, phosphocarrier protein HPr; K11189 phosphocarrier protein
scnpilot_solids1_trim150_scaffold_2881_9
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6823..7215)
DNA (393bp) protein (131aa)
PTS system fructose subfamily transporter subunit IIA; K02821 PTS system, ascorbate-specific IIA component [EC:2.7.1.69]
PTS system sugar transporter subunit IIA n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00036D6F4A
PTS system, mannose-specific IIA component {ECO:0000313|EMBL:KGQ17767.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
Displaying 9 items

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