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scnpilot_solids1_trim150_scaffold_4537

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4537_1
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..251
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T5X7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT69355.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
hypothetical protein; K11900 type VI secretion system protein ImpC
scnpilot_solids1_trim150_scaffold_4537_2
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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294..785
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00030242E0
Putative type VI secretion system effector hcp1-like protein {ECO:0000313|EMBL:AIC16927.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
type VI secretion system effector; K11903 type VI secretion system secreted protein Hcp
scnpilot_solids1_trim150_scaffold_4537_3
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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864..1304
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T6J4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT69358.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
hypothetical protein; K11897 type VI secretion system protein ImpF
scnpilot_solids1_trim150_scaffold_4537_4
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1319..2881)
DNA (1563bp) protein (521aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D29102 rbh
Uncharacterized protein {ECO:0000313|EMBL:AKC85917.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
type 12 methyltransferase
scnpilot_solids1_trim150_scaffold_4537_5
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2878..4446)
DNA (1569bp) protein (523aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003788458
putative signal transduction histidine kinase
scnpilot_solids1_trim150_scaffold_4537_trna_1
unknown

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comp(4662..4735)
DNA (74bp)
transferRNA Pro
scnpilot_solids1_trim150_scaffold_4537_6
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4881..5180
DNA (300bp) protein (100aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
hisS; histidyl-tRNA synthetase; K01892 histidyl-tRNA synthetase [EC:6.1.1.21]
Histidine--tRNA ligase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UVW7_PSEUP
Displaying 7 items

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