ggKbase home page

scnpilot_solids1_trim150_scaffold_4537_6

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_69_8

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 4881..5180

Top 3 Functional Annotations

Value Algorithm Source
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 85.0
  • Bit_score: 157
  • Evalue 1.10e-35
hisS; histidyl-tRNA synthetase; K01892 histidyl-tRNA synthetase [EC:6.1.1.21] similarity KEGG
DB: KEGG
  • Identity: 89.4
  • Coverage: 85.0
  • Bit_score: 154
  • Evalue 2.20e-35
Histidine--tRNA ligase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UVW7_PSEUP similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 85.0
  • Bit_score: 154
  • Evalue 6.90e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter defluvii → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
GTGATCAAGCCACGCACCCCTACCGGGGTCATGGAACTGCTGCCGCGCGACCAGATCGCGTTCCAGCGGATGCTCGACACCATCCGCCAGACCTTCGAGCGCTTCGGCTTCCTGCCGGTGGAAACGCCGGTGATGGAGCTGTCCGAGGTGCTGCTGACCAAGTCGGGCGGCGAAACCGAGCGGCAGGTGTACTTCGTGCAGTCCACCGGTGCGCTGGAGAAGCAGGCGGAGGGCTTGCCGGAACTGGCGCTGCGCTCGCTCACCGAAAGCCGCGACCAGCAGTACGAGATGCCGTTCGGC
PROTEIN sequence
Length: 100
VIKPRTPTGVMELLPRDQIAFQRMLDTIRQTFERFGFLPVETPVMELSEVLLTKSGGETERQVYFVQSTGALEKQAEGLPELALRSLTESRDQQYEMPFG