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scnpilot_solids1_trim150_scaffold_4550

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4550_1
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..413)
DNA (411bp) protein (137aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Ly
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
ribose-phosphate pyrophosphokinase n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00036131C0
scnpilot_solids1_trim150_scaffold_4550_trna_1
unknown

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comp(458..537)
DNA (80bp)
transferRNA Gln
scnpilot_solids1_trim150_scaffold_4550_2
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(536..1408)
DNA (873bp) protein (291aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.
ispE; 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase (EC:2.7.1.148); K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Xanthomonas RepID=UPI0003664487
scnpilot_solids1_trim150_scaffold_4550_3
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1405..2034)
DNA (630bp) protein (210aa)
LolB n=1 Tax=uncultured bacterium pTW2 RepID=B8PZU4_9BACT
Outer-membrane lipoprotein LolB {ECO:0000256|HAMAP-Rule:MF_00233, ECO:0000256|SAAS:SAAS00002103}; Flags: Precursor;; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
outer membrane lipoprotein LolB; K02494 outer membrane lipoprotein LolB
scnpilot_solids1_trim150_scaffold_4550_4
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2031..3719)
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=uncultured bacterium pTW2 RepID=B8PZU5_9BACT
Membrane protein {ECO:0000313|EMBL:KGM53890.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_4550_5
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3811..5058
DNA (1248bp) protein (416aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
glutamyl-tRNA reductase; K02492 glutamyl-tRNA reductase [EC:1.2.1.70]
glutamyl-tRNA reductase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F5B559
scnpilot_solids1_trim150_scaffold_4550_6
unknown

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5055..5171
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 7 items

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