ggKbase home page

scnpilot_solids1_trim150_scaffold_4569

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4569_1
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..2506)
DNA (2505bp) protein (835aa)
Glutamate synthase subunit alpha {ECO:0000313|EMBL:EYR68892.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EYR68892.1};; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
gltB; glutamate synthase subunit alpha; K00265 glutamate synthase (NADPH/NADH) large chain [EC:1.4.1.13 1.4.1.14]
glutamate synthase subunit alpha n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DFA9AA
scnpilot_solids1_trim150_scaffold_4569_2
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2680..3240)
DNA (561bp) protein (187aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012127}; Short=TC-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852};; EC=2.7.7.87 {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012122};; L-threonylcarbamoyladenylate synthase {ECO:0000256|HAMAP-Rule:MF_01852}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; TaxID=56458 spec
tRNA threonylcarbamoyladenosine biosynthesis protein RimN n=1 Tax=Xanthomonas sacchari RepID=UPI000262A195
translation factor (sua5) protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein
scnpilot_solids1_trim150_scaffold_4569_3
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3289..5112)
DNA (1824bp) protein (608aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518};; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. MAFF 311562.;"
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2]
DNA topoisomerase 1 n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0B7L2_9XANT
scnpilot_solids1_trim150_scaffold_4569_4
unknown

Not on your lists

5475..5639
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4569_5
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6069..6560)
DNA (492bp) protein (164aa)
Protein Smg homolog n=2 Tax=Stenotrophomonas RepID=B8L8E4_9GAMM
Protein Smg homolog {ECO:0000256|HAMAP-Rule:MF_00598}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein; K03747 Smg protein
scnpilot_solids1_trim150_scaffold_4569_6
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6615..7772)
DNA (1158bp) protein (386aa)
DNA processing chain A n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UPG7_PSEUP
DNA processing protein DprA; K04096 DNA processing protein
DNA processing chain A {ECO:0000313|EMBL:AER55587.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids1_trim150_scaffold_4569_7
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7821..9017)
DNA (1197bp) protein (399aa)
LysM domain protein n=4 Tax=Xanthomonas campestris RepID=G0CA35_XANCA
Peptidoglycan-binding protein LysM {ECO:0000313|EMBL:KGO98141.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_4569_8
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9173..9682
DNA (510bp) protein (170aa)
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88]
Peptide deformylase n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z2I6_XANCT
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_4569_9
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9687..10121
DNA (435bp) protein (145aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase id=2588177 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Displaying 9 items

View Taxonomy