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scnpilot_solids1_trim150_scaffold_3725

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Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3725_1
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..628
DNA (627bp) protein (209aa)
iron transporter FeoB n=1 Tax=Xanthomonas sacchari RepID=UPI0002630489
Iron transporter FeoB {ECO:0000313|EMBL:KGM54817.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
feoB; ferrous iron uptake protein; K04759 ferrous iron transport protein B
scnpilot_solids1_trim150_scaffold_3725_2
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

625..858
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SVW2_XANCT
Uncharacterized protein {ECO:0000313|EMBL:EYR67983.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_3725_3
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(957..1316)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI000379D07C
Uncharacterized protein {ECO:0000313|EMBL:KGM54815.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_3725_4
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1481..1837)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UN92_PSEUP
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_3725_5
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1834..2340)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZJX1_XANCT
Uncharacterized protein {ECO:0000313|EMBL:EKU25946.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_3725_6
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2458..4068)
DNA (1611bp) protein (537aa)
methylcrotonoyl-CoA carboxylase (EC:6.4.1.4); K01969 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] rbh
Methylcrotonoyl-CoA carboxylase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WTI3_PSEUU rbh
Methylcrotonoyl-CoA carboxylase {ECO:0000313|EMBL:KGM54814.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
scnpilot_solids1_trim150_scaffold_3725_7
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4728..5513
DNA (786bp) protein (262aa)
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
TrmA family RNA methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
23S rRNA methyltransferase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00036C4B6C
scnpilot_solids1_trim150_scaffold_3725_8
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5516..6043
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BD50_9XANT
CYTH domain protein {ECO:0000313|EMBL:KGM57512.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
adenylate cyclase
scnpilot_solids1_trim150_scaffold_3725_9
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6044..7111
DNA (1068bp) protein (356aa)
Beta-hexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00024541}; EC=3.2.1.52 {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00024542};; Beta-N-acetylhexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364}; N-acetyl-beta-glucosaminidase {ECO:0000256|HAMAP-Rule:MF_00364}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
nagZ; Beta N-acetyl-glucosaminidase (EC:3.2.1.52); K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52]
Beta-hexosaminidase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TTZ6_STEMA
scnpilot_solids1_trim150_scaffold_3725_10
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7108..7665
DNA (558bp) protein (186aa)
phosphoribosyltransferase; K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
hypoxanthine phosphoribosyltransferase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B57C42
Uncharacterized protein {ECO:0000313|EMBL:KFN47629.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
scnpilot_solids1_trim150_scaffold_3725_11
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7801..8550
DNA (750bp) protein (250aa)
Probable 6-oxopurine nucleoside phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01963};; Purine nucleoside phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
purine-nucleoside phosphorylase (EC:2.4.2.1); K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
5''''-methylthioadenosine phosphorylase n=1 Tax=Xanthomonas RepID=UPI000262ADE5
scnpilot_solids1_trim150_scaffold_3725_12
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8593..8886
DNA (294bp) protein (98aa)
Cold shock protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WR97_9GAMM
Cold-shock protein {ECO:0000313|EMBL:KGM55521.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
cold shock protein
scnpilot_solids1_trim150_scaffold_3725_13
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9524..9823)
DNA (300bp) protein (100aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D5FF37
Membrane protein {ECO:0000313|EMBL:AHY58177.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
outer membrane protein
scnpilot_solids1_trim150_scaffold_3725_14
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9949..11085)
DNA (1137bp) protein (379aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KGM51857.1}; EC=2.3.1.9 {ECO:0000313|EMBL:KGM51857.1};; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
thlA; acetyl-CoA C-acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
acetyl-CoA acetyltransferase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4BF41
scnpilot_solids1_trim150_scaffold_3725_15
Equid herpesvirus 1, Varicellovirus, Herpesvirales, Viruses

Not on your lists

11551..12243
DNA (693bp) protein (231aa)
Glycoprotein n=1 Tax=Equid herpesvirus 9 RepID=B7XDE6_9ALPH
ORF71 {ECO:0000313|EMBL:AII81802.1}; TaxID=10326 species="Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus.;" source="Equid herpesvirus 1 (Equine herpesvirus 1).;"
scnpilot_solids1_trim150_scaffold_3725_16
unknown

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comp(12371..12940)
DNA (570bp) protein (190aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_3725_17
unknown

Not on your lists

14143..14292
DNA (150bp) protein (50aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_3725_18
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14435..15046)
DNA (612bp) protein (204aa)
lysogenization protein HflD n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E7E9B7
High frequency lysogenization protein HflD homolog {ECO:0000256|HAMAP-Rule:MF_00695}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein; K07153 high frequency lysogenization protein
scnpilot_solids1_trim150_scaffold_3725_19
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15043..16032)
DNA (990bp) protein (330aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
tRNA-specific 2-thiouridylase mnmA; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-]
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5U1L9_STEMA
scnpilot_solids1_trim150_scaffold_3725_20
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

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comp(16169..16372)
DNA (204bp) protein (68aa)
Nucleoporin, putative n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8GKD2_ACACA
nucleoporin, putative
Nucleoporin, putative {ECO:0000313|EMBL:ELR12631.1}; TaxID=1257118 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii str. Neff.;"
Displaying 20 items

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