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scnpilot_solids1_trim150_scaffold_1215

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1215_1
unknown

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comp(3..269)
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1215_2
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(266..1927)
DNA (1662bp) protein (554aa)
Amidohydrolase {ECO:0000313|EMBL:KGM53482.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
Amidohydrolase 3 id=2595778 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
amidohydrolase; K07047 rbh
scnpilot_solids1_trim150_scaffold_1215_3
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2040..3020
DNA (981bp) protein (327aa)
PhoH family protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WR07_PSEUU
PhoH family protein; K06217 phosphate starvation-inducible protein PhoH and related proteins
PhoH family protein {ECO:0000313|EMBL:ADV26679.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_1215_4
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3040..3522
DNA (483bp) protein (161aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
heat-shock protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A600E5
hypothetical protein; K07042 probable rRNA maturation factor
scnpilot_solids1_trim150_scaffold_1215_5
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3597..4475
DNA (879bp) protein (293aa)
Probable magnesium and cobalt efflux protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UEI3_XANAP
Magnesium transporter {ECO:0000313|EMBL:KGM53485.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
corC; magnesium and cobalt efflux protein; K06189 magnesium and cobalt transporter
scnpilot_solids1_trim150_scaffold_1215_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4516..5712
DNA (1197bp) protein (399aa)
membrane protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002EF27FB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH11977.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
scnpilot_solids1_trim150_scaffold_1215_7
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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5744..6739
DNA (996bp) protein (332aa)
Mg2 transporter protein CorA family protein id=2992330 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
corA; magnesium and cobalt transport protein; K03284 magnesium transporter
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_1215_8
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6736..6915)
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G5K5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EHQ53092.1}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
scnpilot_solids1_trim150_scaffold_1215_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6966..8219)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CKF4_STEMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCP10441.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
scnpilot_solids1_trim150_scaffold_1215_10
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8349..10427)
DNA (2079bp) protein (693aa)
peptidase S9 n=1 Tax=Xanthomonas sacchari RepID=UPI000262B402
Peptidase S9 {ECO:0000313|EMBL:KGM53490.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
WD40-like beta Propeller containing protein
scnpilot_solids1_trim150_scaffold_1215_11
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10488..12458)
DNA (1971bp) protein (657aa)
peptide transporter n=1 Tax=Singularimonas variicoloris RepID=UPI0003814035 rbh
Peptide transporter {ECO:0000313|EMBL:KGM56880.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
oliA; oligopeptide transporter
scnpilot_solids1_trim150_scaffold_1215_12
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12660..14669
DNA (2010bp) protein (670aa)
metallopeptidase; K07386 putative endopeptidase [EC:3.4.24.-]
peptidase M13 n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A33F31
Peptidase M13 {ECO:0000313|EMBL:EYR65700.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
scnpilot_solids1_trim150_scaffold_1215_13
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14733..14906)
DNA (174bp) protein (58aa)
Rhomboid family membrane protein n=4 Tax=Xanthomonas campestris RepID=B0RR49_XANCB
Membrane protein {ECO:0000313|EMBL:KGO98144.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
integral membrane protein
Displaying 13 items

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