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scnpilot_solids1_trim150_scaffold_1593

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1593_1
unknown

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2..82
DNA (81bp) protein (27aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1593_2
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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92..2515
DNA (2424bp) protein (808aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
rnr; putative ribonuclease R (RNase R) (EC:3.1.-.-); K12573 ribonuclease R [EC:3.1.-.-]
Ribonuclease R n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3G290_STEMA
scnpilot_solids1_trim150_scaffold_1593_3
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2655..3419
DNA (765bp) protein (255aa)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; 23S rRNA Gm2251 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
TrmH family RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
23S rRNA (guanosine-2''''-O-)-methyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FF6A45
scnpilot_solids1_trim150_scaffold_1593_4
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3419..3685
DNA (267bp) protein (89aa)
Permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWR3_9GAMM
Permease {ECO:0000313|EMBL:KGQ19791.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1593_5
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3846..4514)
DNA (669bp) protein (223aa)
Ribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157, ECO:0000256|SAAS:SAAS00051933}; EC=3.1.13.- {ECO:0000256|HAMAP-Rule:MF_00157};; Exoribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157}; TaxID=1094183 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. musacearum NCPPB 2005.;"
rnt; ribonuclease T; K03683 ribonuclease T [EC:3.1.13.-]
ribonuclease T n=3 Tax=Xanthomonas RepID=UPI0003690AE1
scnpilot_solids1_trim150_scaffold_1593_6
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4556..5305)
DNA (750bp) protein (250aa)
Uncharacterized protein {ECO:0000313|EMBL:KGQ19793.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
Putative uncharacterized protein id=2508160 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein; K09929 hypothetical protein
scnpilot_solids1_trim150_scaffold_1593_7
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5302..6126)
DNA (825bp) protein (275aa)
UPF0276 protein Psesu_0929 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WR35_PSEUU rbh
hypothetical protein; K09930 hypothetical protein rbh
UPF0276 protein Psesu_0929 {ECO:0000256|HAMAP-Rule:MF_00697}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_1593_8
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6130..6585)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WR36_PSEUU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADV26781.1}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_1593_9
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6683..7387)
DNA (705bp) protein (235aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UPN9_PSEUP rbh
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
putative phosphate transport system-like protein; K02039 phosphate transport system protein rbh
scnpilot_solids1_trim150_scaffold_1593_10
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7468..8304)
DNA (837bp) protein (279aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
phosphate ABC transporter ATPase; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27]
Phosphate ABC transporter ATP-binding component n=3 Tax=Xanthomonas campestris pv. translucens RepID=K8ZH25_XANCT
scnpilot_solids1_trim150_scaffold_1593_11
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8297..9160)
DNA (864bp) protein (288aa)
Phosphate ABC transporter, inner membrane subunit PstA n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WR39_PSEUU
phosphate ABC transporter inner membrane subunit PstA; K02038 phosphate transport system permease protein
Phosphate ABC transporter, inner membrane subunit PstA {ECO:0000313|EMBL:ADV26784.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_1593_12
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(9157..10128)
DNA (972bp) protein (324aa)
Probable phospate abc transporter permease pstc abc transporter, permease protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UED8_XANAP
Phosphate ABC transporter permease {ECO:0000313|EMBL:KIJ71994.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
pstC; phosphate ABC transporter permease; K02037 phosphate transport system permease protein
scnpilot_solids1_trim150_scaffold_1593_13
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10192..11259)
DNA (1068bp) protein (356aa)
phosphate ABC transporter substrate-binding protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI00039F1D08
pstS; ABC transporter phosphate binding protein
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=366649 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fuscans subsp. fuscans.;"
scnpilot_solids1_trim150_scaffold_1593_14
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11416..12189)
DNA (774bp) protein (258aa)
Phosphate-binding protein PstS n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7H9L0_XANCT
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
phosphate ABC transporter substrate-binding protein; K02040 phosphate transport system substrate-binding protein
Displaying 14 items

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