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scnpilot_solids1_trim150_scaffold_1612

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1612_1
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..271
DNA (270bp) protein (90aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
Ndufs7, NV19193; NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa; K03940 NADH dehydrogenase (ubiquinone) Fe-S protein 7 [EC:1.6.5.3 1.6.99.3]
NADH-quinone oxidoreductase subunit B id=2698515 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
scnpilot_solids1_trim150_scaffold_1612_2
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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268..1023
DNA (756bp) protein (252aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; TaxID=925775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria ATCC 35937.;"
NADH dehydrogenase subunit C (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BCB9_9XANT
scnpilot_solids1_trim150_scaffold_1612_3
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1020..2330
DNA (1311bp) protein (437aa)
NADH dehydrogenase I subunit D (EC:1.6.99.5); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3]
NADH dehydrogenase subunit D n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030D8859
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_1612_4
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2461..2898
DNA (438bp) protein (146aa)
NADH-quinone oxidoreductase subunit E; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3]
NADH dehydrogenase subunit E n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031F5218
NADH dehydrogenase {ECO:0000313|EMBL:AKC87725.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
scnpilot_solids1_trim150_scaffold_1612_5
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2898..4265
DNA (1368bp) protein (456aa)
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase, F subunit {ECO:0000313|EMBL:ADV27682.1}; EC=1.6.99.5 {ECO:0000313|EMBL:ADV27682.1};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
NADH dehydrogenase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000379F5A3 rbh
scnpilot_solids1_trim150_scaffold_1612_6
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4262..6496
DNA (2235bp) protein (745aa)
NADH-quinone oxidoreductase subunit G; K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3]
NADH-quinone oxidoreductase, chain G n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WU32_PSEUU
NADH dehydrogenase subunit G {ECO:0000313|EMBL:EYR67808.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
scnpilot_solids1_trim150_scaffold_1612_7
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6493..7587
DNA (1095bp) protein (365aa)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
respiratory-chain NADH dehydrogenase subunit 1; K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit H n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WU31_PSEUU
scnpilot_solids1_trim150_scaffold_1612_8
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7584..8075
DNA (492bp) protein (164aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
nuoI; NADH-quinone oxidoreductase subunitI(nadh dehydrogenaseIsubunitI (ndh-1 subunitI (nuo9) oxidoreductase (EC:1.6.99.5); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3]
NADH dehydrogenase subunit I n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030CA988
scnpilot_solids1_trim150_scaffold_1612_9
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8089..8730
DNA (642bp) protein (214aa)
nuoJ; NADH dehydrogenase subunit J (EC:1.6.5.3); K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3]
NADH dehydrogenase subunit J n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SST1_XANCT
NADH-ubiquinone oxidoreductase chain J {ECO:0000313|EMBL:KGQ19207.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
scnpilot_solids1_trim150_scaffold_1612_10
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8727..9050
DNA (324bp) protein (108aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
NADH dehydrogenase subunit K (EC:1.6.5.3); K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit K n=19 Tax=Xanthomonas RepID=NUOK_XANAC
scnpilot_solids1_trim150_scaffold_1612_11
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9055..11127
DNA (2073bp) protein (691aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3]
NADH:ubiquinone oxidoreductase subunit L n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002D84078
NADH-ubiquinone oxidoreductase chain L {ECO:0000313|EMBL:KGQ19209.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
scnpilot_solids1_trim150_scaffold_1612_12
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11144..12670
DNA (1527bp) protein (509aa)
NADH:ubiquinone oxidoreductase subunit M n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B36E30 rbh
NADH-ubiquinone oxidoreductase chain M {ECO:0000313|EMBL:KGQ19210.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
nuoM; NADH:ubiquinone oxidoreductase subunit 4 (chain M)
scnpilot_solids1_trim150_scaffold_1612_13
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12684..14138
DNA (1455bp) protein (485aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
nuoN; NADH dehydrogenase subunit N; K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3]
NADH:ubiquinone oxidoreductase subunit N n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A481CF
scnpilot_solids1_trim150_scaffold_1612_14
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14257..14520)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002EEB6AD
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADV27922.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_1612_15
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14691..15122)
DNA (432bp) protein (144aa)
cytochrome C biogenesis protein CcsA n=1 Tax=Xanthomonas RepID=UPI00035FAF6C
cytochrome c class I
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_1612_16
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15131..15550)
DNA (420bp) protein (140aa)
Cytochrome C4 n=1 Tax=Xanthomonas campestris pv. campestris (strain B100) RepID=B0RSF1_XANCB
Cytochrome C {ECO:0000313|EMBL:KGM56362.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
cytochrome C4
scnpilot_solids1_trim150_scaffold_1612_17
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15790..16932
DNA (1143bp) protein (381aa)
hemolysin D n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003657B5F
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KGQ18989.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
RND family efflux transporter MFP subunit
scnpilot_solids1_trim150_scaffold_1612_18
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16929..20426
DNA (3498bp) protein (1166aa)
Acriflavin resistance protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSK9_PSEUU
Acriflavin resistance protein {ECO:0000313|EMBL:ADV27223.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
scnpilot_solids1_trim150_scaffold_1612_19
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20431..23136
DNA (2706bp) protein (902aa)
acriflavin resistance protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F27A7C
Acriflavin resistance protein {ECO:0000313|EMBL:ADV27224.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
acriflavin resistance protein rbh
Displaying 19 items

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