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scnpilot_solids1_trim150_scaffold_1768

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1768_1
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..542
DNA (540bp) protein (180aa)
proline:sodium symporter n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002FB09C8
Proline:sodium symporter PutP {ECO:0000313|EMBL:KGM55395.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
sodium/proline symporter; K11928 sodium/proline symporter
scnpilot_solids1_trim150_scaffold_1768_2
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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548..1513
DNA (966bp) protein (322aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75]
tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=Xanthomonas sacchari RepID=UPI000262A5C4
scnpilot_solids1_trim150_scaffold_1768_3
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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1686..1958
DNA (273bp) protein (91aa)
RNA-binding protein Hfq n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UR18_PSEUP
hfq; RNA-binding protein Hfq; K03666 host factor-I protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids1_trim150_scaffold_1768_4
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2013..3368
DNA (1356bp) protein (452aa)
GTPase HflX n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F91381
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
GTP-binding proten HflX; K03665 GTP-binding protein HflX
scnpilot_solids1_trim150_scaffold_1768_5
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3365..4474
DNA (1110bp) protein (370aa)
HflK protein; K04088 membrane protease subunit HflK [EC:3.4.-.-]
membrane protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002ED49A0
Membrane protein {ECO:0000313|EMBL:KGM55399.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
scnpilot_solids1_trim150_scaffold_1768_6
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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4471..5334
DNA (864bp) protein (288aa)
HflC protein; K04087 membrane protease subunit HflC [EC:3.4.-.-] rbh
membane protease HflC n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000305F705 rbh
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_1768_7
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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5377..5562
DNA (186bp) protein (62aa)
membrane protein n=2 Tax=Xanthomonas axonopodis RepID=UPI0002F7A20B
Putative inner membrane protein YjeT (clustered with HflC); K09937 hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_1768_8
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5800..7092
DNA (1293bp) protein (431aa)
adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4]
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
Adenylosuccinate synthetase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WV39_PSEUU
scnpilot_solids1_trim150_scaffold_1768_9
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7162..7479)
DNA (318bp) protein (106aa)
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_solids1_trim150_scaffold_1768_10
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7563..8264
DNA (702bp) protein (234aa)
Channel protein, hemolysin III family n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WRE7_PSEUU
Hemolysin III {ECO:0000313|EMBL:KGM51797.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
hemolysin III family channel protein; K11068 hemolysin III
scnpilot_solids1_trim150_scaffold_1768_11
Xanthomonas oryzae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8356..11016
DNA (2661bp) protein (887aa)
aminopeptidase N; K01256 aminopeptidase N [EC:3.4.11.2] rbh
Aminopeptidase N n=1 Tax=Xanthomonas oryzae pv. oryzicola BLS256 RepID=G7TGK8_9XANT rbh
Aminopeptidase N {ECO:0000313|EMBL:AJQ88613.1}; TaxID=129394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas oryzae pv. oryzicola.;"
Displaying 11 items

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