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scnpilot_solids1_trim150_scaffold_1858

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1858_1
Kangiella koreensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1519
DNA (1518bp) protein (506aa)
hypothetical protein, partial n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036C6393
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ACV25536.1}; Flags: Precursor;; TaxID=523791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125).;"
scnpilot_solids1_trim150_scaffold_1858_2
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1883..3124
DNA (1242bp) protein (414aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSD5_PSEUU rbh
MFS transporter {ECO:0000313|EMBL:AKC85587.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
major facilitator superfamily protein; K03449 MFS transporter, CP family, cyanate transporter rbh
scnpilot_solids1_trim150_scaffold_1858_3
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3229..3786
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B615D8
Uncharacterized protein {ECO:0000313|EMBL:KFN49096.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1858_4
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3805..4005)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262ADFA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADV27422.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_1858_5
unknown

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comp(4020..4298)
DNA (279bp) protein (93aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1858_6
unknown

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4677..4949
DNA (273bp) protein (91aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1858_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4971..6497)
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE93_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97784.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1858_8
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6654..7382
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C0F2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:AKC86755.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1858_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7396..8238)
DNA (843bp) protein (281aa)
PAS/PAC sensor-containing diguanylate cyclase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWC9_9GAMM
PAS/PAC sensor-containing diguanylate cyclase {ECO:0000313|EMBL:EIL91520.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PAS/PAC sensor-containing diguanylate cyclase
scnpilot_solids1_trim150_scaffold_1858_10
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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8377..9114
DNA (738bp) protein (246aa)
Deoxyribose-phosphate aldolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYJ1_9GAMM
deoxyribose-phosphate aldolase
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids1_trim150_scaffold_1858_11
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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9118..10323
DNA (1206bp) protein (402aa)
Phosphopentomutase n=1 Tax=Rhodanobacter denitrificans RepID=M4NGD7_9GAMM
phosphopentomutase
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids1_trim150_scaffold_1858_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10665..11018
DNA (354bp) protein (118aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTW1_9GAMM
purine-nucleoside phosphorylase, DeoD family
scnpilot_solids1_trim150_scaffold_1858_13
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11078..11524
DNA (447bp) protein (149aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN45154.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
id=2990036 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
scnpilot_solids1_trim150_scaffold_1858_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11662..11928
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCS1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97262.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1858_15
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12266..12604
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ59_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89350.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1858_16
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12622..13443)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DE3E07 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGQ18570.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
scnpilot_solids1_trim150_scaffold_1858_17
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13553..14404)
DNA (852bp) protein (284aa)
methyltransferase n=1 Tax=Dyella ginsengisoli RepID=UPI00034CF82B
Methyltransferase {ECO:0000313|EMBL:AKC87027.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
putative methyltransferase
scnpilot_solids1_trim150_scaffold_1858_18
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14484..15392
DNA (909bp) protein (303aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WT39_PSEUU
Acyltransferase {ECO:0000313|EMBL:KGM55794.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
phospholipid/glycerol acyltransferase
scnpilot_solids1_trim150_scaffold_1858_19
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15456..15875
DNA (420bp) protein (140aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM53362.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
Cytochrome b561 id=3038417 bin=GWF1_Xanthomonadales_69_6 species=Pseudomonas psychrotolerans genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
cytochrome b561
Displaying 19 items

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