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scnpilot_solids1_trim150_scaffold_1331_2

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_69_8

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 909..1211

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit beta n=11 Tax=Stenotrophomonas RepID=IHFB_STRM5 similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 96.0
  • Bit_score: 173
  • Evalue 8.50e-41
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 99.0
  • Bit_score: 175
  • Evalue 4.10e-41
ihfB; integration host factor subunit beta; K05788 integration host factor subunit beta similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 96.0
  • Bit_score: 173
  • Evalue 2.70e-41

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGACCAAGTCCGAACTCATCGAACTGCTCGCTCGCCGCCAGCCGCATCTCAAAGCCGACGACGTCGACATGGCGGTGAAGACGCTGCTGCAGATGATGGGAGCGGCGCTGGCCGCCGGCGAGCGGATCGAGATCCGCGGGTTCGGCAGTTTTTCGCTGCATTACCGGCCGCCACGCACCGGCCGCAATCCGAAGACCGGCGATGCCGTCGCCCTGCCGGGCAAGCATGTGCCGCACTTCAAGCCGGGCAAGGAACTGCGCGAGCGGGTCACCGGCGTATTGCCGCTGCCTGTTCAGGACTGA
PROTEIN sequence
Length: 101
MTKSELIELLARRQPHLKADDVDMAVKTLLQMMGAALAAGERIEIRGFGSFSLHYRPPRTGRNPKTGDAVALPGKHVPHFKPGKELRERVTGVLPLPVQD*