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scnpilot_solids1_trim150_scaffold_1010_3

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_69_8

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 1207..2628

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase, large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 472.0
  • Bit_score: 839
  • Evalue 5.30e-241
  • rbh
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 472.0
  • Bit_score: 839
  • Evalue 2.40e-240
isopropylmalate isomerase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031E74B2 similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 472.0
  • Bit_score: 843
  • Evalue 8.90e-242
  • rbh

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1422
ATGCCCGGCAAGACCCTCTACGACAAACTGTGGGAGAGGCACGAGGTCAGCCGTCGCGACGACGGTTCCTCGCTGCTTTACATCGACCGCCACATCCTCCACGAGGTGACCTCGCCGCAGGCGTTCGAGGGCCTGCGGCTGGCGGGTCGCAAGCCATGGCGGGTGGACGCCAACCTCGCCACGCCCGACCACAACGTGCCGACCACGCGGACCGAACGCGCCGGCGGGCTGGCCGCCATCGCCGACGAGACCTCGCGCATCCAGGTGCGCACGCTGGACGAGAACTGCGCGGACTTCGGCATCCTCGAGTTCCCGATGGACGACCCGCGCCAGGGCATCGTCCACGTGGTCGGTCCGGAGCAGGGCGCCACGCTGCCGGGCATGACCGTGGTCTGCGGCGATTCGCACACCTCCACGCACGGCGCGTTCGGCGCGCTGGCGCACGGCATCGGCACCTCCGAGGTCGAGCACGTGCTCGCCACCCAGTGCCTGGTCGCGCAGAAGATGAAGAACATGCGCGTGCGCGTGGAGGGCGAGCTGCCGCCGGGCGTGACCGCCAAGGACATCGTGCTGGCCATCATCGGCCGCATCGGCACCGCCGGCGGCACCGGCCATGCGCTGGAATTCTCCGGCAGCGCGATCCGCGCGCTGTCGATGGAAGGCCGCATGACCGTCTGCAACATGGCGATCGAGGCGGGCGCGCGGGTCGGCATGGTGGCTGTGGACGACACCACCATCGACTACGTGCGCGGCCGTCCGTTCGCGCCGGCTGGCGAGCAGTGGGATGCGGCGGTGGCGCTGTGGCGCACGCTGGTCTCCGACGCCGATGCGCATTTCGACGTCGACATCGAACTGCGCGCGGAAGACATCCGCCCGCAGGTGAGCTGGGGCACTTCGCCGGAAATGGTACTGGCGGTGGACGGCAACGTGCCCGATCCCGCGCGCGAGGCCGACCCGGTGAAAAAGGATTCCATTACGCGCGCCCTCAAGTACATGGGCCTGCGCGCCAACCAGCCGATCACCGACATCCGGCTGGATCGCGTCTTCATCGGCTCCTGCACCAATGCGCGCATCGAGGACCTGCGCGCGGCGGCGGCGGTGGCGAAGGGCCGCAAGGTGGCGGCGACGGTGAAGCAGGCGCTGGTGGTGTCGGGCTCCGGGCTGGTCAAGGCGCAGGCCGAGCGCGAAGGGCTGGATCGCATCTTCCTCGACGCCGGCTTCGAGTGGCGCGAGCCCGGCTGTTCGATGTGCCTGGCCATGAATCCGGATCGGCTGGAAAGCGGCGAACACTGCGCGTCCACCTCCAACCGCAATTTCGAGGGCCGGCAGGGCGCCGGCGGCCGCACCCATCTGGTCAGCCCGGCGATGGCCGCCGCCGCCGCGATTGCCGGCTACTTCATCGACGTGCGGGAGCTGCAATGA
PROTEIN sequence
Length: 474
MPGKTLYDKLWERHEVSRRDDGSSLLYIDRHILHEVTSPQAFEGLRLAGRKPWRVDANLATPDHNVPTTRTERAGGLAAIADETSRIQVRTLDENCADFGILEFPMDDPRQGIVHVVGPEQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQCLVAQKMKNMRVRVEGELPPGVTAKDIVLAIIGRIGTAGGTGHALEFSGSAIRALSMEGRMTVCNMAIEAGARVGMVAVDDTTIDYVRGRPFAPAGEQWDAAVALWRTLVSDADAHFDVDIELRAEDIRPQVSWGTSPEMVLAVDGNVPDPAREADPVKKDSITRALKYMGLRANQPITDIRLDRVFIGSCTNARIEDLRAAAAVAKGRKVAATVKQALVVSGSGLVKAQAEREGLDRIFLDAGFEWREPGCSMCLAMNPDRLESGEHCASTSNRNFEGRQGAGGRTHLVSPAMAAAAAIAGYFIDVRELQ*