ggKbase home page

scnpilot_solids1_trim150_scaffold_1010_4

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_69_8

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 2625..3269

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 214.0
  • Bit_score: 374
  • Evalue 9.80e-101
3-isopropylmalate dehydratase, small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 214.0
  • Bit_score: 369
  • Evalue 5.40e-100
  • rbh
3-isopropylmalate dehydratase small subunit n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F060DA similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 212.0
  • Bit_score: 370
  • Evalue 1.00e-99
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGAATCCCTTCACCAAGCACACGGGCGTGGCGGTGCCGCTGGATCGCGCCAACGTCGACACGGACCAGATCATCCCCAAGCAGTTCCTGAAGTCGATCCGCCGCAGCGGCTTCGGCCCCAACCTGTTCGACGAGTGGCGCTACCTCGACGTCGGCCAGCCGGGACAGGACTGTTCGACGCGGCCGCTGAATCCGGACTTCGTTTTCAACCAGCCGCGCTATGCGGGCGCCAGCGTGCTGCTGGCGCGCGCCAACTTCGGCTGCGGCTCCAGCCGCGAGCACGCACCGTGGGCGCTGGCCGAATACGGCATCCGCGCGATCATCGCGCCGAGCTTCGCCGACATCTTCTTCAACAACAGCTTCAAGAACGGGCTGCTGCCGATCGTGCTGCAGGACGAGGAAGTGGATGCGCTGTTCGCGCAGTGCGACGCCGCGGAAGGCTATGCGTTGGCCATCGACCTGCAGGCGCAGACGGTGACGCGGCCCGATGGGACGCGGCACCACTTCGCCGTCGACGCCTTCCGCAAGCACTGCCTGCTGCACGGGCTGGACGACATCGGCCTGACCCTGCAGCACGCCGACGCCATCCGCGCCTTCGAGGCGCGCCATCGCGCGGCGCAGCCGTGGGTGTTCGCGCGCGGCTGA
PROTEIN sequence
Length: 215
MNPFTKHTGVAVPLDRANVDTDQIIPKQFLKSIRRSGFGPNLFDEWRYLDVGQPGQDCSTRPLNPDFVFNQPRYAGASVLLARANFGCGSSREHAPWALAEYGIRAIIAPSFADIFFNNSFKNGLLPIVLQDEEVDALFAQCDAAEGYALAIDLQAQTVTRPDGTRHHFAVDAFRKHCLLHGLDDIGLTLQHADAIRAFEARHRAAQPWVFARG*