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scnpilot_solids1_trim150_scaffold_1010_5

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_69_8

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(3382..4509)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 375.0
  • Bit_score: 553
  • Evalue 2.70e-154
3-isopropylmalate dehydrogenase; K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 403.0
  • Bit_score: 535
  • Evalue 1.30e-149
3-isopropylmalate dehydrogenase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UTE4_PSEUP similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 403.0
  • Bit_score: 535
  • Evalue 4.10e-149

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Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1128
ATGCACGCCAACATCGTCGTACTGCCGGGTGACGGCATCGGCCCCGAAGTCACCGCCGCCGCCGTTGCCGTCCTGCGCGCGGTGGCCGCGCGCTATGGCCACGACTTCGACTTCAGCGAACACCTGATTGGCGGCGCCGCCATCGACGCCAGCGGCAGCGCGCTGCCGGATGCCACGCTGGCGGCGGCCCGATCCGCCGACGCCATCCTGCTGGGCGCGGTCGGCGGACCGAAGTGGTCCGACCCCAGCGCCAAGGTGCGCCCGGAACAGGGGTTGCTGGCGATCCGCAAGGCGCTGGGCCTGTACGCCAACCTGCGCCCGGTCAAGCCGCACGCGGCCACGCTGGGCGCCTCGCCGATCAAGCCCCACCTACTGCAGGGCGTGGACCTGATCGTGGTGCGCGAGCTGACCGGCGGCATCTATTTCGGCGACAAGGTCCGCAGTGACAGCGACGCATCCGACCTGTGCCGCTACAGCGTCGCCGAGATCGAGCGCGTGGTGCGCCACGCCGCCCGGCTGGCGCGCGCGCGCAGCGGCAGGCTGACTTCAGTGGACAAGGCCAACGTGCTGGAAACCTCGCGGCTGTGGCGCGAGGTGGCGACGCGCGTCGTGCGCGAGGAGTTCCCGGACGTGCAGCTGGAACACCAGCTGGTGGATTCCATGGCAATGCACCTGCTGGCGCGGCCGCGATCATTCGACGTGATCGTGACCGAGAACATGTTCGGCGACATCCTCACCGACGAAGCTTCGATGCTGGCCGGCTCGCTGGGCCTGCTGCCGTCGGCTTCCCTGGGCGAAGGCAGCAGCGGGCCCGATGGATCGGCGCAGCCGAGCCGTCAAATTGGGCTATACGAGCCGATCCACGGCAGTGCGCCGGACATCGCCGGCAAGGGCGTTGCCAATCCCTACGCCGCTATCCTCAGCGCGGCGATGCTGCTGCGCCATGCGCTGGGGCTGGAGGGCGAGGCGCAGTGCGTGGAGCTGGCGGTTTCACGCGCGCTGGAAGCGGGCGTATTCACCGCCGACCTGGCCAGCGACCGCAGCCGCGCGGTCGGCACGCGCGCCGTTACCGCCGCGGTGCTGGAACAGCTGGAGCTGCCCTGCCATGTGATGGAGCTGCGCGACTGA
PROTEIN sequence
Length: 376
MHANIVVLPGDGIGPEVTAAAVAVLRAVAARYGHDFDFSEHLIGGAAIDASGSALPDATLAAARSADAILLGAVGGPKWSDPSAKVRPEQGLLAIRKALGLYANLRPVKPHAATLGASPIKPHLLQGVDLIVVRELTGGIYFGDKVRSDSDASDLCRYSVAEIERVVRHAARLARARSGRLTSVDKANVLETSRLWREVATRVVREEFPDVQLEHQLVDSMAMHLLARPRSFDVIVTENMFGDILTDEASMLAGSLGLLPSASLGEGSSGPDGSAQPSRQIGLYEPIHGSAPDIAGKGVANPYAAILSAAMLLRHALGLEGEAQCVELAVSRALEAGVFTADLASDRSRAVGTRAVTAAVLEQLELPCHVMELRD*