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scnpilot_solids1_trim150_scaffold_2478_4

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_69_8

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 3661..4602

Top 3 Functional Annotations

Value Algorithm Source
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F763C4 similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 301.0
  • Bit_score: 468
  • Evalue 4.00e-129
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 288.0
  • Bit_score: 485
  • Evalue 4.40e-134
tRNA(Cytosine32)-2-thiocytidine synthetase; K14058 tRNA 2-thiocytidine biosynthesis protein TtcA similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 294.0
  • Bit_score: 462
  • Evalue 1.20e-127

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Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGAATATTCCCGCGCACCCGCTCACCGACCTTCCGGCCCCCAGGCGCAAGCACGAGGCCGACAAGCTGGCCAAGCGCCTGCGCCACCAGGTAGGCAAGGCGATCGCCGACTTCGGCATGATCGAGGACGGCGACCGGGTCATGGTCTGCCTGTCCGGCGGCAAGGACAGCTACACCATGCTGGACGTTCTTCTGCAGCTGCAGAAGAAGGCCCCCGTGCGCTTCAGCATCACCGCGGTCAACCTCGACCAGAAGCAGCCGGGCTTCCCCGAGCACGTGCTGCCGGAATACCTGCGCTCGATCGGGGTGGACTTCCACATCCTCGAGCAGGACACCTACTCGGTGGTCAGCCGGGTGATTCCGGAAGGCAAGACCATGTGCTCGCTGTGTTCGCGGCTGCGCCGCGGCGCGCTCTACACCTACGCCGAGCAGCACGGTTTCACCAAGATCGCGCTGGGCCACCACCGCGATGACCTGGTCAACACCTTCTTCCTCAACCTGTTCTTCCACGCGAAGTTGAGCGGCATGCCGCCCAAGCTGCTCAGCGACGACGGCAAGCACGTGGTGATCCGCCCGCTGGCCTACGTGCGCGAGGACGACATCGAAGCCTACGCCGAGGCGAAGGGCTTCCCGATCATCCCCTGCAACCTGTGCGGCTCGCAGGAGAACCTGCAGCGCAAGCAGGTCAAGAAGATGCTGGCGCAGTGGGAGAAGGAGACGCCCGGCCGCATCGAGACGATGGCGCGCGCGCTGGGCGACATCCGTCCGTCGCAGCTCAGCGACCCGAAGCTGTTCGACTTCCTCACCCTCGGCAAGCGCGGCGACGCGGCGCTGCCCGATGCGCATGCCTGGCTGGCCGGCGCCCCCGCCGAACCGGAGCCGGTCGCGATGGCGCTGCATCCCGTGCGCAACCACGACGGCCTGGACATCCTCAAGTCCTGA
PROTEIN sequence
Length: 314
MNIPAHPLTDLPAPRRKHEADKLAKRLRHQVGKAIADFGMIEDGDRVMVCLSGGKDSYTMLDVLLQLQKKAPVRFSITAVNLDQKQPGFPEHVLPEYLRSIGVDFHILEQDTYSVVSRVIPEGKTMCSLCSRLRRGALYTYAEQHGFTKIALGHHRDDLVNTFFLNLFFHAKLSGMPPKLLSDDGKHVVIRPLAYVREDDIEAYAEAKGFPIIPCNLCGSQENLQRKQVKKMLAQWEKETPGRIETMARALGDIRPSQLSDPKLFDFLTLGKRGDAALPDAHAWLAGAPAEPEPVAMALHPVRNHDGLDILKS*