ggKbase home page

scnpilot_solids1_trim150_scaffold_2478_5

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_69_8

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 4678..5580

Top 3 Functional Annotations

Value Algorithm Source
recombinase RdgC n=1 Tax=Xanthomonas sp. M97 RepID=UPI00039BB968 similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 301.0
  • Bit_score: 415
  • Evalue 6.50e-113
Recombination-associated protein RdgC {ECO:0000256|HAMAP-Rule:MF_00194, ECO:0000256|SAAS:SAAS00073315}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 300.0
  • Bit_score: 454
  • Evalue 1.00e-124
recombination associated protein RdgC; K03554 recombination associated protein RdgC similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 301.0
  • Bit_score: 414
  • Evalue 3.50e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGTTCTTCCGCAACCTGACCCTGTTCCGCTTCCCCGCCTCGCTCGACCTGTCCGACCTCGAACCGCAGCTGGCCGAATGCGCGCTCAAGCCGGTCGGCCCGCTGGAACTCTCCTCGCGCGGCTTCGTCGCGCCGATGGGCCAGCACCACGACGGCTTCCAGCACCTGTGCGACGACGCGCGCTGGCTGACCGTGGGTGGCGAGGACAAGCTCCTGCCCGGCGCGGTGGTCAACGACCTGCTGCAGAAGAAGCTGGCCGCGATCGAGGAGAAGGAAGGCCGCAAGCCCGGCGGCCGCACCCGCAAGCGGCTGAAGGACGAACTGATCACCGAACTGCTGCCGCGCGCGTTCGTGCGCCCGGTGCGCAGCGACGCCCTGCTCGACGGCCAGCTGGGCGTGATCGCGGTGGACACCTCCTCGCGCAAGTCGGCCGAGTCGGTGGTGTCGGAAGTGCGCCGCGCGCTGGGCAGCTTCCCGGCACTGCCACTGAACGCCGAAGTGGCGCCGCGCGCCATCCTCACCGGCTGGCTGGCCGGCGACGCGCTGCCCGACGGTCTGGCGCTGGGCGACGAGTGCGAGCTGCGCGACCCCACCGACACCGGCGCGGTGGTGAAGATCCAGCGCATGGAGCTGTCCGGCGAGGAGATCAGCAAGCATCTCGAGGCCGGCAAGCAGTGCACACGGTTGGCGCTGGTGCTGGACGACCACGTCAGCTTCGTGATCGGCGAGGACCTGATCGTGCGCAAGTTCAAGCTGCTGGACGGCGCGGTGGACCAGATGGAGTCCACCGAACACGACGACATCGTGGCCGAACTGCAGGCCCGCTTCGCGCTGATGACGGGCGAGTTCAAGCGTCTGTTCGCCGTGCTCGAAAGCGCGTTCAAGCTCAGCAAGGCGGAGTGA
PROTEIN sequence
Length: 301
MFFRNLTLFRFPASLDLSDLEPQLAECALKPVGPLELSSRGFVAPMGQHHDGFQHLCDDARWLTVGGEDKLLPGAVVNDLLQKKLAAIEEKEGRKPGGRTRKRLKDELITELLPRAFVRPVRSDALLDGQLGVIAVDTSSRKSAESVVSEVRRALGSFPALPLNAEVAPRAILTGWLAGDALPDGLALGDECELRDPTDTGAVVKIQRMELSGEEISKHLEAGKQCTRLALVLDDHVSFVIGEDLIVRKFKLLDGAVDQMESTEHDDIVAELQARFALMTGEFKRLFAVLESAFKLSKAE*