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scnpilot_solids1_trim150_scaffold_4318_6

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_69_8

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(3917..4618)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06183 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 231.0
  • Bit_score: 376
  • Evalue 6.30e-102
pseudouridine synthase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002D86888 similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 232.0
  • Bit_score: 379
  • Evalue 2.40e-102
  • rbh
Pseudouridine synthase {ECO:0000313|EMBL:AKC88227.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 231.0
  • Bit_score: 378
  • Evalue 9.60e-102

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGAAGCTGGTCAAGCACATCGCCAACCTCGGTTACGGCAGTCGCAAGGACGTGCAGTGGATGTTCCGCGAGGGCCGCATCACCAACGCCGCCGGCGAGGTGCTGTATGCGGACGATCCGCTGGACCACGACGACGTGCGCGTCGACGGCGAGCCACTGGATCCGCCGCCCGGCCTGCTGCTGATCCTGCACAAGCCTGTGGATTTCACCTGCTCGACCAAGGACCGGGGGCGGGTGGTGTACGACCTGCTGCCACCGCGCTACCGCTTGCGCAGTCCGGCGCTGTCCACGGTGGGCCGGCTCGATCGCGACACCTCCGGCCTGCTGCTGCTGACCGATGATGGTCAGCTGCTGCACCGGATCATCGCGCCAAAGTCGAAGCTGCCGAAGGTGTACCTGGCGACGCTGGCGGAGGATCTGCGCGGCGACGAGGCGGCGGTCTTCGCCAGCGGAACGCTGATGCTGGAAGGCGAGCAGACCCCGCTGCTGCCGGCTGAACTGGAAGTGCTGGGGCCGCGCAGCGCCCGGCTCACCCTGCACGAGGGCCGCTACCACCAGGTGCGGCGGATGTTCGCTGCGGTCGGCAATCATGTCGCCGTGCTGCATCGCGAACGCGTCGGCGGGCTGGCGCTGGACGGGCTGCCCGGGGGCGAATGGCGGATGCTGGGTGAGGGTGACCGCGCACAGCTGTTCGCGATCTGA
PROTEIN sequence
Length: 234
MKLVKHIANLGYGSRKDVQWMFREGRITNAAGEVLYADDPLDHDDVRVDGEPLDPPPGLLLILHKPVDFTCSTKDRGRVVYDLLPPRYRLRSPALSTVGRLDRDTSGLLLLTDDGQLLHRIIAPKSKLPKVYLATLAEDLRGDEAAVFASGTLMLEGEQTPLLPAELEVLGPRSARLTLHEGRYHQVRRMFAAVGNHVAVLHRERVGGLALDGLPGGEWRMLGEGDRAQLFAI*