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scnpilot_solids1_trim150_scaffold_4318

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4318_1
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..315)
DNA (315bp) protein (105aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
lpdA; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KT29_STEMA
scnpilot_solids1_trim150_scaffold_4318_2
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(326..1714)
DNA (1389bp) protein (463aa)
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]
Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPZ4_PSEUU
Dihydrolipoamide acetyltransferase {ECO:0000313|EMBL:AKC86425.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
scnpilot_solids1_trim150_scaffold_4318_3
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1887..2777)
DNA (891bp) protein (297aa)
Integral membrane protein DUF6 n=4 Tax=Xanthomonas campestris RepID=G0CB48_XANCA
Membrane protein {ECO:0000313|EMBL:EYR67625.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein; K15270 S-adenosylmethionine uptake transporter
scnpilot_solids1_trim150_scaffold_4318_4
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2832..3314
DNA (483bp) protein (161aa)
UPF0234 protein Psesu_0302 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPY6_PSEUU
UPF0234 protein N799_13605 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
hypothetical protein; K09767 hypothetical protein
scnpilot_solids1_trim150_scaffold_4318_5
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3332..3901
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002EA10CD
hypothetical protein; K09941 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AER57631.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids1_trim150_scaffold_4318_6
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3917..4618)
DNA (702bp) protein (234aa)
pseudouridine synthase; K06183 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
pseudouridine synthase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002D86888 rbh
Pseudouridine synthase {ECO:0000313|EMBL:AKC88227.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
scnpilot_solids1_trim150_scaffold_4318_7
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4615..5400)
DNA (786bp) protein (262aa)
ribosomal RNA small subunit methyltransferase C; K00564 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
16S rRNA methyltransferase, partial n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI000369A334
Uncharacterized protein {ECO:0000313|EMBL:KGO99146.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
Displaying 7 items

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