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scnpilot_solids1_trim150_scaffold_10258_3

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_69_8

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 2877..3266

Top 3 Functional Annotations

Value Algorithm Source
rluD; putative ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 128.0
  • Bit_score: 216
  • Evalue 6.00e-54
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 128.0
  • Bit_score: 216
  • Evalue 2.10e-53
Pseudouridine synthase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CIT4_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 128.0
  • Bit_score: 216
  • Evalue 1.50e-53

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGGCCGTGCGCGAGGATGGCAAGGATGCGGTGACCCACTACCGCCTGCGCGAACGCTTCCGCGCCCATACCGCGCTGGAGTGCCGGCTGGAAACCGGTCGCACCCATCAGATCCGCGTGCACATGGCGCATCTGAAGCACCCGATCCTCGGCGATCCGCTGTACGGCGGATCGCTGCGGTTGCCGAAGGGCGCTTCGGAGGAGCTGATCGCCGTGCTGCGCGGCTTCCGGCGGCAGGCGCTGCATGCCGAGGTGCTGGAGTTCACGCATCCGGTCAGTGGCGAAGCGGTGCGCTGCGAGGCGCCGGTGCCGGAAGACATGCGCGAGCTGATGCGGGTGCTGCGCGAGGACGCCGCCGCGCACGTCGAAGCCGAGCGTACGCGGCGATGA
PROTEIN sequence
Length: 130
MAVREDGKDAVTHYRLRERFRAHTALECRLETGRTHQIRVHMAHLKHPILGDPLYGGSLRLPKGASEELIAVLRGFRRQALHAEVLEFTHPVSGEAVRCEAPVPEDMRELMRVLREDAAAHVEAERTRR*