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scnpilot_solids1_trim150_scaffold_10258

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_10258_1
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1330
DNA (1329bp) protein (443aa)
NAD+ synthetase; K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
NAD synthetase n=1 Tax=Pseudomonas geniculata RepID=UPI00029A0C10
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_10258_2
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1403..2242)
DNA (840bp) protein (280aa)
competence protein n=1 Tax=Xanthomonas RepID=UPI00035D102C
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
competence lipoprotein; K05807 putative lipoprotein
scnpilot_solids1_trim150_scaffold_10258_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2877..3266
DNA (390bp) protein (130aa)
rluD; putative ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
Pseudouridine synthase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CIT4_STEMA
scnpilot_solids1_trim150_scaffold_10258_4
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3263..3997
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UPX6_PSEUP rbh
hypothetical protein; K05810 conserved hypothetical protein rbh
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids1_trim150_scaffold_10258_5
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3994..4536
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030E49A6
Uncharacterized protein {ECO:0000313|EMBL:AKC86103.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_10258_6
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4509..4796)
DNA (288bp) protein (96aa)
GIY-YIG nuclease superfamily protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UQ58_PSEUP
GIY-YIG nuclease superfamily protein; K07461 putative endonuclease
GIY-YIG nuclease superfamily protein {ECO:0000313|EMBL:AER55670.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids1_trim150_scaffold_10258_7
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4793..5023)
DNA (231bp) protein (77aa)
Peptidase M20 n=1 Tax=alpha proteobacterium JLT2015 RepID=M2SFU6_9PROT
Peptidase M20 {ECO:0000313|EMBL:EMD84245.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
peptidase M20
Displaying 7 items

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