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scnpilot_solids1_trim150_scaffold_2220

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2220_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..1371)
DNA (1371bp) protein (457aa)
potassium transporter peripheral membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003739FD6 rbh
trkA, sapG; potassium transporter peripheral membrane component; K03499 trk system potassium uptake protein TrkA rbh
Trk system potassium uptake protein TrkA {ECO:0000313|EMBL:AAZ95973.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_solids1_trim150_scaffold_2220_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1387..2661)
DNA (1275bp) protein (425aa)
nitrogen assimilation regulatory protein NtrX n=1 Tax=Thiobacillus denitrificans RepID=UPI000365D4F3 rbh
two component Fis family transcriptional regulator rbh
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_2220_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2658..4793)
DNA (2136bp) protein (712aa)
multi-sensor signal transduction histidine kinase (EC:2.7.3.-) rbh
histidine kinase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003738914 rbh
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_2220_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4793..5428)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000376F0AE rbh
proline rich signal peptide protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_2220_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5382..6662)
DNA (1281bp) protein (427aa)
Fmu, rRNA SAM-dependent methyltransferase; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] rbh
16S rRNA methyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003632888 rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids1_trim150_scaffold_2220_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6767..7714)
DNA (948bp) protein (316aa)
methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9]
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A5411 rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_2220_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7725..8258)
DNA (534bp) protein (178aa)
peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] rbh
peptide deformylase n=1 Tax=Thiobacillus denitrificans RepID=UPI000382D3A1 rbh
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_2220_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8405..9088
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037BC5F8
peptidoglycan-binding LysM-like protein rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 8 items

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