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scnpilot_solids1_trim150_scaffold_2695

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2695_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(108..1994)
-----------------
DNA (1887bp)
protein (629aa)
diguanylate cyclase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003746ED4 rbh
response regulator receiver modulated diguanylate cyclase rbh
Putative diguanylate cyclase (GGDEF domain) {ECO:0000313|EMBL:AAZ97976.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_solids1_trim150_scaffold_2695_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2251..2685)
-----------------
DNA (435bp)
protein (145aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000369EF0D
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_2695_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2678..3310)
-----------------
DNA (633bp)
protein (211aa)
DNA-(apurinic or apyrimidinic site) lyase / endonuclease III (EC:3.2.2.- 4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] id=12495624 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
DNA-(apurinic or apyrimidinic site) lyase / endonuclease III (EC:3.2.2.- 4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids1_trim150_scaffold_2695_4
unknown

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comp(3333..3485)
-----------------
DNA (153bp)
protein (51aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000365D084
scnpilot_solids1_trim150_scaffold_2695_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3482..4159)
-----------------
DNA (678bp)
protein (226aa)
electron transporter RsxE n=1 Tax=Thiobacillus denitrificans RepID=UPI00036DCE4D rbh
electron transport complex RsxE subunit; K03613 electron transport complex protein RnfE rbh
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_solids1_trim150_scaffold_2695_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4156..4809)
-----------------
DNA (654bp)
protein (218aa)
electron transporter RnfG n=1 Tax=Thiobacillus denitrificans RepID=UPI00037FA946 rbh
RnfABCDGE type electron transport complex subunit G; K03612 electron transport complex protein RnfG
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_solids1_trim150_scaffold_2695_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4806..5840)
-----------------
DNA (1035bp)
protein (345aa)
electron transporter RnfG n=1 Tax=Thiobacillus denitrificans RepID=UPI00037556D7 rbh
RnfABCDGE type electron transport complex subunit D; K03614 electron transport complex protein RnfD
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids1_trim150_scaffold_2695_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5864..7534)
-----------------
DNA (1671bp)
protein (557aa)
electron transporter RnfC n=1 Tax=Thiobacillus denitrificans RepID=UPI00036006DA rbh
electron transport complex protein RnfC; K03615 electron transport complex protein RnfC rbh
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_solids1_trim150_scaffold_2695_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7531..7800)
-----------------
DNA (270bp)
protein (90aa)
electron transporter RnfB n=1 Tax=Thiobacillus denitrificans RepID=UPI00038266B7
electron transport complex protein RnfB; K03616 electron transport complex protein RnfB
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 9 items

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