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scnpilot_solids1_trim150_scaffold_2003

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2003_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..317)
DNA (315bp) protein (105aa)
Cytochrome b n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0E1_9GAMM
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytochrome b subunit of the bc complex
scnpilot_solids1_trim150_scaffold_2003_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(317..922)
DNA (606bp) protein (202aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0E0_9GAMM rbh
ubiquinol-cytochrome c reductase, iron-sulfur subunit
scnpilot_solids1_trim150_scaffold_2003_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1087..2259
DNA (1173bp) protein (391aa)
Trypsin-like serine protease with C-terminal PDZ domain n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0D9_9GAMM rbh
Trypsin-like serine protease with C-terminal PDZ domain {ECO:0000313|EMBL:EIL92930.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
trypsin-like serine protease with C-terminal PDZ domain
scnpilot_solids1_trim150_scaffold_2003_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2285..3442)
DNA (1158bp) protein (386aa)
Lytic murein transglycosylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0D8_9GAMM rbh
Lytic murein transglycosylase {ECO:0000313|EMBL:EIL92929.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
soluble lytic murein transglycosylase-like protein
scnpilot_solids1_trim150_scaffold_2003_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3690..5057
DNA (1368bp) protein (456aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathip
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0D7_9GAMM rbh
tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
scnpilot_solids1_trim150_scaffold_2003_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5054..5545
DNA (492bp) protein (164aa)
Histone acetyltransferase HPA11 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0D6_9GAMM rbh
Histone acetyltransferase HPA11 {ECO:0000313|EMBL:EIL92927.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acetyltransferase
scnpilot_solids1_trim150_scaffold_2003_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5565..6674)
DNA (1110bp) protein (370aa)
ABC transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0D5_9GAMM rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type multidrug transport system, permease component
scnpilot_solids1_trim150_scaffold_2003_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6671..7630)
DNA (960bp) protein (320aa)
ABC transporter-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0D4_9GAMM rbh
ABC transporter-like protein {ECO:0000313|EMBL:EIL92925.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type multidrug transport system, ATPase component
scnpilot_solids1_trim150_scaffold_2003_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7627..8595)
DNA (969bp) protein (323aa)
Hemolysin D n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0D3_9GAMM rbh
Hemolysin D {ECO:0000313|EMBL:EIL92924.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
multidrug resistance efflux pump
scnpilot_solids1_trim150_scaffold_2003_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8592..9266)
DNA (675bp) protein (225aa)
Regulatory protein TetR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0D2_9GAMM rbh
Regulatory protein TetR {ECO:0000313|EMBL:EIL92923.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator rbh
scnpilot_solids1_trim150_scaffold_2003_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9328..9903
DNA (576bp) protein (192aa)
Phosphate starvation-inducible protein PhoH n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0D1_9GAMM
Phosphate starvation-inducible protein PhoH {ECO:0000313|EMBL:EIL92922.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphate starvation-inducible protein PhoH, predicted ATPase
Displaying 11 items

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