ggKbase home page

scnpilot_solids1_trim150_scaffold_2635

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2635_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1341)
DNA (1341bp) protein (447aa)
Probable cytosol aminopeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVI6_9GAMM rbh
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
aminopeptidase A
scnpilot_solids1_trim150_scaffold_2635_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1356..2555
DNA (1200bp) protein (400aa)
Putative permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVI7_9GAMM rbh
Putative permease {ECO:0000313|EMBL:EIL91228.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative permease
scnpilot_solids1_trim150_scaffold_2635_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2552..3652
DNA (1101bp) protein (367aa)
Putative permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVI8_9GAMM rbh
Putative permease {ECO:0000313|EMBL:EIL91229.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative permease
scnpilot_solids1_trim150_scaffold_2635_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3990..5009
DNA (1020bp) protein (340aa)
threonine aldolase (EC:4.1.2.5)
Threonine aldolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVI9_9GAMM rbh
Threonine aldolase {ECO:0000313|EMBL:EIL91230.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_2635_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5860..7113)
DNA (1254bp) protein (418aa)
Polyhydroxyalkanoate depolymerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSK7_9GAMM rbh
Polyhydroxyalkanoate depolymerase {ECO:0000313|EMBL:EIL90198.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
polyhydroxyalkanoate depolymerase, intracellular
scnpilot_solids1_trim150_scaffold_2635_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7203..7970)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSK6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL90197.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
methyltransferase family protein rbh
scnpilot_solids1_trim150_scaffold_2635_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8026..8571)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSK5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL90196.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative membrane protein/domain protein
scnpilot_solids1_trim150_scaffold_2635_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8591..9496
DNA (906bp) protein (302aa)
Tyrosine recombinase XerD n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSK4_9GAMM rbh
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
tyrosine recombinase XerD
scnpilot_solids1_trim150_scaffold_2635_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9687..10460
DNA (774bp) protein (258aa)
Protein-disulfide isomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSK3_9GAMM rbh
Protein-disulfide isomerase {ECO:0000313|EMBL:EIL90194.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
protein-disulfide isomerase
scnpilot_solids1_trim150_scaffold_2635_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10773..12314
DNA (1542bp) protein (514aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474};; Formylglycinamide ribonucleotide amidotransferase {ECO:0000256|HAMAP-Rule:MF_00419}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSK2_9GAMM
scnpilot_solids1_trim150_scaffold_2635_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12311..14662
DNA (2352bp) protein (784aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474};; Formylglycinamide ribonucleotide amidotransferase {ECO:0000256|HAMAP-Rule:MF_00419}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSK2_9GAMM
scnpilot_solids1_trim150_scaffold_2635_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14692..15432
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZD7_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2635_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15500..16420
DNA (921bp) protein (307aa)
Putative glycosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSK1_9GAMM rbh
Putative glycosyltransferase {ECO:0000313|EMBL:EIL90192.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative glycosyltransferase
scnpilot_solids1_trim150_scaffold_2635_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16482..17387
DNA (906bp) protein (302aa)
Putative permease, DMT superfamily protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSK0_9GAMM rbh
Putative permease, DMT superfamily protein {ECO:0000313|EMBL:EIL90191.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative permease, DMT superfamily
scnpilot_solids1_trim150_scaffold_2635_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17384..17887)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSJ7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL90188.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2635_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17994..18188)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSJ6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90187.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
uncharacterized small protein
scnpilot_solids1_trim150_scaffold_2635_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18190..20031)
DNA (1842bp) protein (614aa)
Carbon starvation protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSJ5_9GAMM
Carbon starvation protein {ECO:0000313|EMBL:EIL90186.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
carbon starvation protein, predicted membrane protein
Displaying 17 items

View Taxonomy