ggKbase home page

scnpilot_solids1_trim150_scaffold_409

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_409_1
unknown

Not on your lists

comp(95..376)
DNA (282bp) protein (94aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_409_2
unknown

Not on your lists

comp(843..1193)
DNA (351bp) protein (117aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_409_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1622..2611
DNA (990bp) protein (330aa)
integrase n=1 Tax=Dyella ginsengisoli RepID=UPI00036C0D48
Putative integrase {ECO:0000313|EMBL:EIL89190.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
integron integrase
scnpilot_solids1_trim150_scaffold_409_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2658..11276)
DNA (8619bp) protein (2873aa)
Glycosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPP8_9GAMM rbh
Glycosyltransferase {ECO:0000313|EMBL:EIL89189.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cellobiose phosphorylase rbh
scnpilot_solids1_trim150_scaffold_409_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11447..11908
DNA (462bp) protein (154aa)
N-acetyltransferase GCN5 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPP7_9GAMM rbh
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EIL89188.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acetyltransferase
scnpilot_solids1_trim150_scaffold_409_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11922..14405)
DNA (2484bp) protein (828aa)
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPP6_9GAMM rbh
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:EIL89187.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
scnpilot_solids1_trim150_scaffold_409_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14499..15680)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPP5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89186.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_409_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15756..17039
DNA (1284bp) protein (428aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EIL89185.1}; EC=2.3.1.9 {ECO:0000313|EMBL:EIL89185.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Acetyl-CoA acetyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPP4_9GAMM rbh
acetyl-CoA acetyltransferase
scnpilot_solids1_trim150_scaffold_409_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17092..17646
DNA (555bp) protein (185aa)
TonB family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPP3_9GAMM rbh
TonB family protein {ECO:0000313|EMBL:EIL89184.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TonB family protein
scnpilot_solids1_trim150_scaffold_409_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17739..19613)
DNA (1875bp) protein (625aa)
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPP2_9GAMM rbh
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase {ECO:0000313|EMBL:EIL89183.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
scnpilot_solids1_trim150_scaffold_409_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19721..20194)
DNA (474bp) protein (158aa)
Phosphohistidine phosphatase SixA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPP1_9GAMM rbh
Phosphohistidine phosphatase SixA {ECO:0000313|EMBL:EIL89182.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphohistidine phosphatase SixA
scnpilot_solids1_trim150_scaffold_409_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20250..20882)
DNA (633bp) protein (211aa)
Partition protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPP0_9GAMM rbh
Partition protein {ECO:0000313|EMBL:EIL89181.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ATPase involved in chromosome partitioning
scnpilot_solids1_trim150_scaffold_409_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21014..22054)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPN9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89180.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_409_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22214..22408
DNA (195bp) protein (65aa)
NusB antitermination factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPN8_9GAMM
NusB antitermination factor {ECO:0000313|EMBL:EIL89179.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_409_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22511..23380)
DNA (870bp) protein (290aa)
spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPN7_9GAMM rbh
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_409_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23667..25556
DNA (1890bp) protein (630aa)
Biosynthetic arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01417}; Short=ADC {ECO:0000256|HAMAP-Rule:MF_01417};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01417, ECO:0000256|SAAS:SAAS00212226};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
arginine decarboxylase (EC:4.1.1.19)
Biosynthetic arginine decarboxylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPN6_9GAMM rbh
scnpilot_solids1_trim150_scaffold_409_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25660..26460
DNA (801bp) protein (267aa)
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:EIL89176.1}; EC=1.1.1.30 {ECO:0000313|EMBL:EIL89176.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
3-hydroxybutyrate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPN5_9GAMM rbh
3-hydroxybutyrate dehydrogenase
scnpilot_solids1_trim150_scaffold_409_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26555..27310)
DNA (756bp) protein (252aa)
Putative oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPN4_9GAMM rbh
Putative oxidoreductase {ECO:0000313|EMBL:EIL89175.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
short-chain alcohol dehydrogenase rbh
scnpilot_solids1_trim150_scaffold_409_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27333..28031)
DNA (699bp) protein (233aa)
Cell division protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPN3_9GAMM rbh
Cell division protein {ECO:0000313|EMBL:EIL89174.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cell division protein
scnpilot_solids1_trim150_scaffold_409_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(28031..29719)
DNA (1689bp) protein (563aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPN2_9GAMM rbh
scnpilot_solids1_trim150_scaffold_409_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30228..30899)
DNA (672bp) protein (224aa)
DNA repair protein radc n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPN1_9GAMM rbh
DNA repair protein radc {ECO:0000313|EMBL:EIL89172.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA repair protein
scnpilot_solids1_trim150_scaffold_409_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30998..32203
DNA (1206bp) protein (402aa)
Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase {ECO:0000313|EMBL:EIL89171.1}; EC=6.3.2.5 {ECO:0000313|EMBL:EIL89171.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:4.1.1.36 6.3.2.5)
Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPN0_9GAMM rbh
scnpilot_solids1_trim150_scaffold_409_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32200..32658
DNA (459bp) protein (153aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPM9_9GAMM rbh
scnpilot_solids1_trim150_scaffold_409_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32719..35064
DNA (2346bp) protein (782aa)
Phosphomannomutase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPM8_9GAMM rbh
Phosphomannomutase {ECO:0000313|EMBL:EIL89169.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphomannomutase
scnpilot_solids1_trim150_scaffold_409_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35120..35764)
DNA (645bp) protein (215aa)
ABC transporter ATPase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPM7_9GAMM rbh
ABC transporter ATPase {ECO:0000313|EMBL:EIL89168.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_409_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35891..36538)
DNA (648bp) protein (216aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Orotate phosphoribosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPM6_9GAMM rbh
orotate phosphoribosyltransferase
scnpilot_solids1_trim150_scaffold_409_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36691..37461
DNA (771bp) protein (257aa)
Exodeoxyribonuclease III n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPM5_9GAMM rbh
Exodeoxyribonuclease III {ECO:0000313|EMBL:EIL89166.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
exodeoxyribonuclease III
scnpilot_solids1_trim150_scaffold_409_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37451..38767
DNA (1317bp) protein (439aa)
Signal transducer n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPM4_9GAMM rbh
Signal transducer {ECO:0000313|EMBL:EIL89165.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Major Facilitator Superfamily transporter rbh
scnpilot_solids1_trim150_scaffold_409_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38925..39227
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPM3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89164.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_409_30
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39197..40330)
DNA (1134bp) protein (378aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPM2_9GAMM rbh
molecular chaperone
Displaying items 1-30 of 32 in total

View Taxonomy