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scnpilot_solids1_trim150_scaffold_416

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_416_1
unknown

Not on your lists

comp(1..75)
DNA (75bp) protein (25aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_416_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(655..879)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NM93_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88841.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_416_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1053..1361)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDK5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88840.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_416_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1358..2152)
DNA (795bp) protein (265aa)
Phage integrase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWN0_9GAMM
site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:AGG88839.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_416_5
unknown

Not on your lists

comp(2781..2954)
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_416_6
unknown

Not on your lists

comp(3111..3410)
DNA (300bp) protein (100aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_416_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3835..4137)
DNA (303bp) protein (101aa)
Peptidase propeptide domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFK8_9GAMM
Peptidase propeptide domain-containing protein
Peptidase propeptide domain-containing protein {ECO:0000313|EMBL:AGG88837.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_416_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4461..4664
DNA (204bp) protein (68aa)
Glyoxylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWL0_9GAMM
Glyoxylase {ECO:0000313|EMBL:EIL91601.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_416_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4667..5098)
DNA (432bp) protein (144aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Cytosine/adenosine deaminase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWK9_9GAMM
cytosine/adenosine deaminase
scnpilot_solids1_trim150_scaffold_416_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5234..6814)
DNA (1581bp) protein (527aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
GMP synthase (glutamine-hydrolyzing) (EC:6.3.5.2) rbh
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWK8_9GAMM rbh
scnpilot_solids1_trim150_scaffold_416_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6984..8441)
DNA (1458bp) protein (486aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX42_9GAMM rbh
scnpilot_solids1_trim150_scaffold_416_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8531..9400)
DNA (870bp) protein (290aa)
5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX41_9GAMM rbh
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_416_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9470..10018
DNA (549bp) protein (183aa)
Putative acetyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX40_9GAMM rbh
Putative acetyltransferase {ECO:0000313|EMBL:EIL91781.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acetyltransferase
scnpilot_solids1_trim150_scaffold_416_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10026..11429)
DNA (1404bp) protein (468aa)
GTPase Der n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX39_9GAMM rbh
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ribosome-associated GTPase EngA
scnpilot_solids1_trim150_scaffold_416_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11452..12648)
DNA (1197bp) protein (399aa)
Outer membrane protein assembly factor BamB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX38_9GAMM rbh
Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923}; Flags: Precursor;; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Beta-barrel assembly machine subunit BamB
scnpilot_solids1_trim150_scaffold_416_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12645..13295)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX37_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL91778.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_416_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13451..14440)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX36_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL91777.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_416_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14437..15225)
DNA (789bp) protein (263aa)
Type IV pilus biogenesis/stability protein PilW n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX35_9GAMM rbh
Type IV pilus biogenesis/stability protein PilW {ECO:0000313|EMBL:EIL91776.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
type IV pilus biogenesis/stability protein PilW
scnpilot_solids1_trim150_scaffold_416_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15215..16351)
DNA (1137bp) protein (379aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX34_9GAMM rbh
scnpilot_solids1_trim150_scaffold_416_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16355..16780)
DNA (426bp) protein (142aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX33_9GAMM
scnpilot_solids1_trim150_scaffold_416_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16965..17630
DNA (666bp) protein (222aa)
Transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX32_9GAMM rbh
Transcriptional regulator {ECO:0000313|EMBL:EIL91773.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_416_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17669..20056
DNA (2388bp) protein (796aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35) rbh
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX31_9GAMM rbh
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EIL91772.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_416_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20257..21462
DNA (1206bp) protein (402aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EIL91771.1}; EC=2.3.1.9 {ECO:0000313|EMBL:EIL91771.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Acetyl-CoA acetyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX30_9GAMM rbh
acetyl-CoA acetyltransferase rbh
scnpilot_solids1_trim150_scaffold_416_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21599..22174)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX29_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL91770.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_416_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22602..23540)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX28_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL91769.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_416_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24046..25239
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX27_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL91768.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_416_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25261..26562
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX26_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL91767.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_416_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26559..26819
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX25_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91766.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_416_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26951..27871
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX24_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL91765.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_416_30
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28302..28883
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX23_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL91764.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Displaying items 1-30 of 36 in total

View Taxonomy