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scnpilot_solids1_trim150_scaffold_446

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_446_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..804)
DNA (804bp) protein (268aa)
Chloromuconate cycloisomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1W1_9GAMM
Chloromuconate cycloisomerase {ECO:0000313|EMBL:EIL93452.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase
scnpilot_solids1_trim150_scaffold_446_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(853..3417)
DNA (2565bp) protein (855aa)
NLP/P60 protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1W2_9GAMM rbh
NLP/P60 protein {ECO:0000313|EMBL:EIL93453.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cell wall-associated hydrolase, invasion-associated protein
scnpilot_solids1_trim150_scaffold_446_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3583..5109
DNA (1527bp) protein (509aa)
Transglutaminase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1W4_9GAMM rbh
Transglutaminase {ECO:0000313|EMBL:EIL93455.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transglutaminase-like enzyme, predicted cysteine protease rbh
scnpilot_solids1_trim150_scaffold_446_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5163..8192
DNA (3030bp) protein (1010aa)
Oar protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRQ3_9GAMM rbh
Oar protein {ECO:0000313|EMBL:EIL89894.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
outer membrane receptor protein rbh
scnpilot_solids1_trim150_scaffold_446_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8398..9594
DNA (1197bp) protein (399aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Diaminopimelate decarboxylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1W6_9GAMM rbh
diaminopimelate decarboxylase
scnpilot_solids1_trim150_scaffold_446_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9591..10802
DNA (1212bp) protein (404aa)
Membrane dipeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1W7_9GAMM rbh
Membrane dipeptidase {ECO:0000313|EMBL:EIL93458.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Zn-dependent dipeptidase, microsomal dipeptidase
scnpilot_solids1_trim150_scaffold_446_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10789..12387
DNA (1599bp) protein (533aa)
Beta-lactamase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1W8_9GAMM rbh
Beta-lactamase {ECO:0000313|EMBL:EIL93459.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
penicillin-binding protein, beta-lactamase class C
scnpilot_solids1_trim150_scaffold_446_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12384..13091
DNA (708bp) protein (236aa)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; EC=3.4.13.22 {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Peptidase M15D vanX D-ala-D-ala dipeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1W9_9GAMM rbh
D-Ala-D-Ala dipeptidase vanX
scnpilot_solids1_trim150_scaffold_446_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13123..14178
DNA (1056bp) protein (352aa)
Beta-lactamase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1X0_9GAMM rbh
Beta-lactamase {ECO:0000313|EMBL:EIL93461.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
penicillin-binding protein, beta-lactamase class C rbh
scnpilot_solids1_trim150_scaffold_446_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14178..14945
DNA (768bp) protein (256aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1X1_9GAMM rbh
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EIL93462.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
negative regulator of beta-lactamase expression rbh
scnpilot_solids1_trim150_scaffold_446_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14935..15675)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1X2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93463.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_446_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15747..18866)
DNA (3120bp) protein (1040aa)
Heavy metal efflux pump CzcA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1X3_9GAMM rbh
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:EIL93464.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
heavy metal efflux pump, cobalt-zinc-cadmium
scnpilot_solids1_trim150_scaffold_446_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18863..20038)
DNA (1176bp) protein (392aa)
Secretion protein HlyD n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1X4_9GAMM rbh
Secretion protein HlyD {ECO:0000313|EMBL:EIL93465.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RND family efflux transporter, MFP subunit
scnpilot_solids1_trim150_scaffold_446_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20035..21549)
DNA (1515bp) protein (505aa)
Heavy metal cation tricomponent efflux outer membrane porin ZneC n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1X5_9GAMM rbh
Heavy metal cation tricomponent efflux outer membrane porin ZneC {ECO:0000313|EMBL:EIL93466.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
efflux transporter, outer membrane factor lipoprotein, NodT family
scnpilot_solids1_trim150_scaffold_446_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21792..22103
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1X7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93468.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_446_16
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22135..22851)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00037A33DB
Uncharacterized protein {ECO:0000313|EMBL:KGI76915.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein; K09807 hypothetical protein
scnpilot_solids1_trim150_scaffold_446_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22880..24406)
DNA (1527bp) protein (509aa)
Anthranilate synthase component I {ECO:0000313|EMBL:EIL93469.1}; EC=4.1.3.27 {ECO:0000313|EMBL:EIL93469.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1X8_9GAMM rbh
scnpilot_solids1_trim150_scaffold_446_18
unknown

Not on your lists

24640..25581
DNA (942bp) protein (314aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_446_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25603..27627)
DNA (2025bp) protein (675aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Signal transduction histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1X9_9GAMM rbh
signal transduction histidine kinase
scnpilot_solids1_trim150_scaffold_446_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27655..28233)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Y0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93471.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_446_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28233..28922)
DNA (690bp) protein (230aa)
Proteobacterial dedicated sortase system response regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Y1_9GAMM rbh
Proteobacterial dedicated sortase system response regulator {ECO:0000313|EMBL:EIL93472.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
two component transcriptional regulator, winged helix family
scnpilot_solids1_trim150_scaffold_446_22
unknown

Not on your lists

29097..29210
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_446_23
unknown

Not on your lists

29239..29370
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_446_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29568..31529
DNA (1962bp) protein (654aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Y2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93473.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Vault protein inter-alpha-trypsin rbh
scnpilot_solids1_trim150_scaffold_446_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31526..32167
DNA (642bp) protein (214aa)
sortase family protein, Peptidase C60; K07284 sortase A [EC:3.4.22.70]
Sortase family protein, Peptidase C60 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Y3_9GAMM rbh
Sortase family protein, Peptidase C60 {ECO:0000313|EMBL:EIL93474.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_446_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32312..33043)
DNA (732bp) protein (244aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Y4_9GAMM rbh
scnpilot_solids1_trim150_scaffold_446_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33192..34004)
DNA (813bp) protein (271aa)
Protein with DnaJ-like domain n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Y5_9GAMM rbh
Protein with DnaJ-like domain {ECO:0000313|EMBL:EIL93476.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
protein with DnaJ-like domain
scnpilot_solids1_trim150_scaffold_446_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34001..34327)
DNA (327bp) protein (109aa)
Cytochrome c553 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Y6_9GAMM
Cytochrome c553 {ECO:0000313|EMBL:EIL93477.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytochrome c553
scnpilot_solids1_trim150_scaffold_446_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34452..35348
DNA (897bp) protein (299aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Y7_9GAMM rbh
phosphoribosylaminoimidazole-succinocarboxamide synthase
scnpilot_solids1_trim150_scaffold_446_30
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35370..35840
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Y8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93479.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
Displaying items 1-30 of 33 in total

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