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scnpilot_solids1_trim150_scaffold_575

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_575_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..697
DNA (696bp) protein (232aa)
Glutamate--cysteine ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZV6_9GAMM
Glutamate--cysteine ligase {ECO:0000313|EMBL:EIL92747.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glutamate--cysteine ligase, plant type
scnpilot_solids1_trim150_scaffold_575_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(827..1879)
DNA (1053bp) protein (351aa)
Dihydroorotase {ECO:0000256|RuleBase:RU003440, ECO:0000256|SAAS:SAAS00189352}; EC=3.5.2.3 {ECO:0000256|RuleBase:RU003440, ECO:0000256|SAAS:SAAS00189348};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZV7_9GAMM rbh
scnpilot_solids1_trim150_scaffold_575_3
unknown

Not on your lists

2154..2813
DNA (660bp) protein (220aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_575_4
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2707..3393)
DNA (687bp) protein (229aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
scnpilot_solids1_trim150_scaffold_575_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3468..4460)
DNA (993bp) protein (331aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Delta-aminolevulinic acid dehydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQX9_9GAMM rbh
delta-aminolevulinic acid dehydratase
scnpilot_solids1_trim150_scaffold_575_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4621..5637
DNA (1017bp) protein (339aa)
Glucokinase {ECO:0000313|EMBL:EIL89621.1}; EC=2.7.1.2 {ECO:0000313|EMBL:EIL89621.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Glucokinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQY0_9GAMM rbh
glucokinase
scnpilot_solids1_trim150_scaffold_575_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5669..6352
DNA (684bp) protein (228aa)
Haloacid dehalogenase-like hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQY2_9GAMM rbh
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:EIL89623.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
haloacid dehalogenase superfamily enzyme, subfamily IA
scnpilot_solids1_trim150_scaffold_575_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6465..6779
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQY3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89624.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_575_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6795..8027)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQY4_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89625.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein; K02004 putative ABC transport system permease protein rbh
scnpilot_solids1_trim150_scaffold_575_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8024..9217)
DNA (1194bp) protein (398aa)
Membrane-fusion protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQY5_9GAMM rbh
Membrane-fusion protein {ECO:0000313|EMBL:EIL89626.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
membrane-fusion protein
scnpilot_solids1_trim150_scaffold_575_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9214..11106)
DNA (1893bp) protein (631aa)
Hemolysin D n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQY6_9GAMM rbh
Hemolysin D {ECO:0000313|EMBL:EIL89627.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
membrane-fusion protein
scnpilot_solids1_trim150_scaffold_575_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11090..11764)
DNA (675bp) protein (225aa)
ABC transporter-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQY7_9GAMM rbh
ABC transporter-like protein {ECO:0000313|EMBL:EIL89628.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein
scnpilot_solids1_trim150_scaffold_575_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11877..14894)
DNA (3018bp) protein (1006aa)
DNA/RNA helicase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQY8_9GAMM rbh
DNA/RNA helicase {ECO:0000313|EMBL:EIL89629.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA/RNA helicase, superfamily II, SNF2 family
scnpilot_solids1_trim150_scaffold_575_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15006..16031)
DNA (1026bp) protein (342aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQY9_9GAMM rbh
scnpilot_solids1_trim150_scaffold_575_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16041..16544)
DNA (504bp) protein (168aa)
Protein-export protein SecB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ0_9GAMM rbh
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
protein translocase subunit secB
scnpilot_solids1_trim150_scaffold_575_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16837..17073
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ1_9GAMM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
LSU ribosomal protein L28P
scnpilot_solids1_trim150_scaffold_575_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17084..17251
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ2_9GAMM
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ribosomal protein L33
scnpilot_solids1_trim150_scaffold_575_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17341..17916
DNA (576bp) protein (192aa)
Saccharopine dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ3_9GAMM rbh
Saccharopine dehydrogenase {ECO:0000313|EMBL:EIL89634.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_575_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17906..18322
DNA (417bp) protein (139aa)
Putative thiol-disulfide oxidoreductase DCC n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ4_9GAMM
Putative thiol-disulfide oxidoreductase DCC {ECO:0000313|EMBL:EIL89635.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_575_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18312..19487)
DNA (1176bp) protein (392aa)
Saccharopine dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ5_9GAMM rbh
Saccharopine dehydrogenase {ECO:0000313|EMBL:EIL89636.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Saccharopine dehydrogenase rbh
scnpilot_solids1_trim150_scaffold_575_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19500..20693)
DNA (1194bp) protein (398aa)
Fatty-acid desaturase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ6_9GAMM rbh
Fatty-acid desaturase {ECO:0000313|EMBL:EIL89637.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
fatty-acid desaturase
scnpilot_solids1_trim150_scaffold_575_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20857..21618
DNA (762bp) protein (254aa)
Multidrug ABC transporter ATPase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ7_9GAMM rbh
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:EIL89638.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type multidrug transport system, ATPase component
scnpilot_solids1_trim150_scaffold_575_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21615..22370
DNA (756bp) protein (252aa)
ABC transporter permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ8_9GAMM rbh
ABC transporter permease {ECO:0000313|EMBL:EIL89639.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_575_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22370..23725
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89640.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type uncharacterized transporter
scnpilot_solids1_trim150_scaffold_575_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23729..24226
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VR00_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89641.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_575_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24393..25220
DNA (828bp) protein (276aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
formamidopyrimidine-DNA glycosylase Fpg (EC:4.2.99.18)
Formamidopyrimidine-DNA glycosylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VR01_9GAMM rbh
scnpilot_solids1_trim150_scaffold_575_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25468..26067
DNA (600bp) protein (200aa)
Nitroreductase-like oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VR02_9GAMM rbh
Nitroreductase-like oxidoreductase {ECO:0000313|EMBL:EIL89643.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
oxidoreductase family protein; K07078
scnpilot_solids1_trim150_scaffold_575_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26136..26906)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VR03_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89644.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_575_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26929..27561)
DNA (633bp) protein (211aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
thymidine kinase (EC:2.7.1.21)
Thymidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VR04_9GAMM rbh
scnpilot_solids1_trim150_scaffold_575_30
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27692..27853)
DNA (162bp) protein (54aa)
Hydroxylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VR05_9GAMM
Hydroxylase {ECO:0000313|EMBL:EIL89646.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
flavin-dependent dehydrogenase
Displaying 30 items

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