ggKbase home page

scnpilot_solids1_trim150_scaffold_1445

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1445_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1812)
DNA (1812bp) protein (604aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acetyl-coenzyme A synthetase (EC:6.2.1.1) rbh
Acetyl-coenzyme A synthetase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU99_9GAMM rbh
scnpilot_solids1_trim150_scaffold_1445_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2029..3294
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU98_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90789.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1445_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3449..5104
DNA (1656bp) protein (552aa)
Sugar transport protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU97_9GAMM rbh
Sugar transport protein {ECO:0000313|EMBL:EIL90788.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
arabinose efflux permease family protein rbh
scnpilot_solids1_trim150_scaffold_1445_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5170..5430)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU96_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90787.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Transglycosylase associated protein
scnpilot_solids1_trim150_scaffold_1445_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5587..7263
DNA (1677bp) protein (559aa)
Acyl-CoA synthetase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU95_9GAMM rbh
Acyl-CoA synthetase {ECO:0000313|EMBL:EIL90786.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
scnpilot_solids1_trim150_scaffold_1445_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7270..7503)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU94_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90785.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1445_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7652..8758
DNA (1107bp) protein (369aa)
DNA repair photolyase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU93_9GAMM rbh
DNA repair photolyase {ECO:0000313|EMBL:EIL90784.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA repair photolyase
scnpilot_solids1_trim150_scaffold_1445_8
unknown

Not on your lists

comp(8777..9106)
DNA (330bp) protein (110aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1445_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9119..10591)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU92_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL90783.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_1445_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10588..11481)
DNA (894bp) protein (298aa)
Multidrug ABC transporter ATPase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU91_9GAMM rbh
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:EIL90782.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type multidrug transport system, ATPase component rbh
scnpilot_solids1_trim150_scaffold_1445_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11483..11866)
DNA (384bp) protein (128aa)
Putative transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU90_9GAMM
Putative transcriptional regulator {ECO:0000313|EMBL:EIL90781.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative transcriptional regulator
scnpilot_solids1_trim150_scaffold_1445_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12078..12257
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU89_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90780.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1445_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12331..13512)
DNA (1182bp) protein (394aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU88_9GAMM
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:EIL90779.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dipeptidyl aminopeptidase/acylaminoacyl peptidase
scnpilot_solids1_trim150_scaffold_1445_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13512..14348)
DNA (837bp) protein (279aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU88_9GAMM
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:EIL90779.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dipeptidyl aminopeptidase/acylaminoacyl peptidase
scnpilot_solids1_trim150_scaffold_1445_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14430..15380)
DNA (951bp) protein (317aa)
Patatin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU87_9GAMM rbh
Patatin {ECO:0000313|EMBL:EIL90778.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative esterase of the alpha-beta hydrolase superfamily rbh
scnpilot_solids1_trim150_scaffold_1445_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15412..16428)
DNA (1017bp) protein (339aa)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
fructose-1,6-bisphosphatase (EC:3.1.3.11) rbh
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU86_9GAMM rbh
scnpilot_solids1_trim150_scaffold_1445_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16614..17222
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU85_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL90776.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
scnpilot_solids1_trim150_scaffold_1445_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17234..17419
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU84_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90775.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1445_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17419..17823
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU83_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90774.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1445_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17854..18483
DNA (630bp) protein (210aa)
Glutathione S-transferase domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU82_9GAMM rbh
Glutathione S-transferase domain-containing protein {ECO:0000313|EMBL:EIL90773.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glutathione S-transferase
scnpilot_solids1_trim150_scaffold_1445_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18544..19248
DNA (705bp) protein (235aa)
Helix-turn-helix domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU81_9GAMM rbh
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EIL90772.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative transcriptional regulator
scnpilot_solids1_trim150_scaffold_1445_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19395..21209
DNA (1815bp) protein (605aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU80_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL90771.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1445_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21286..21678
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU79_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90770.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF2384)
scnpilot_solids1_trim150_scaffold_1445_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21769..22479
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU78_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL90769.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RES domain-containing protein
scnpilot_solids1_trim150_scaffold_1445_25
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22568..22780)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL50_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87941.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids1_trim150_scaffold_1445_26
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22927..23175)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL49_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87940.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids1_trim150_scaffold_1445_27
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23179..23451)
DNA (273bp) protein (91aa)
DNA-binding transcriptional activator of psp operon n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL48_9GAMM
DNA-binding transcriptional activator of psp operon {ECO:0000313|EMBL:EIL87939.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
pspC; DNA-binding transcriptional activator of psp operon
scnpilot_solids1_trim150_scaffold_1445_28
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23532..24212)
DNA (681bp) protein (227aa)
Phage shock protein A, PspA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL46_9GAMM rbh
Phage shock protein A, PspA {ECO:0000313|EMBL:EIL87937.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
pspA; phage shock protein A; K03969 phage shock protein A
scnpilot_solids1_trim150_scaffold_1445_29
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24435..25478
DNA (1044bp) protein (348aa)
Psp operon transcriptional activator PspF n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL45_9GAMM rbh
Psp operon transcriptional activator PspF {ECO:0000313|EMBL:EIL87936.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Psp operon transcriptional activator PspF; K03974 psp operon transcriptional activator
scnpilot_solids1_trim150_scaffold_1445_30
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25595..26275
DNA (681bp) protein (227aa)
Putative secreted protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU76_9GAMM rbh
Putative secreted protein {ECO:0000313|EMBL:EIL90767.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
lysophospholipase L1-like esterase rbh
Displaying items 1-30 of 31 in total

View Taxonomy