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scnpilot_solids1_trim150_scaffold_664_22

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 10 / 38
Location: comp(30854..32128)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Z0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 424.0
  • Bit_score: 802
  • Evalue 2.70e-229
  • rbh
ECF subfamily RNA polymerase sigma factor {ECO:0000313|EMBL:EIL94881.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 424.0
  • Bit_score: 802
  • Evalue 3.70e-229
RNA polymerase, sigma subunit, ECF family similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 416.0
  • Bit_score: 683
  • Evalue 5.70e-194

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1275
ATGAGCCAGACTGATACCCATCGCGCGATCGATACCGTATGGCGAAGCGAATCCGCGCGATTGATCGCGGGGCTGACCCGCATGTTGCGCGATGTGGGGCTGGCCGAGGAGCTGGCGCAGGATGCCCTGGTGACGGCGCTGGAGCAGTGGCCGCGCAGCGGTGTGCCGGAGAACCCCGGTGCCTGGCTGATGACCACGGCCAAACACCGCGCGATCGACCGCCTGCGCCGCAGCAAGCTGCTGGAGCGCAAGCATGCGCAACTGGTGCATGAGCTGGAGCACGAGCAGGAGCACGCCCACGCGGCGGTGGAGGCGGCGCTGGACGATCCGTTCGGCGACGACCTGCTGCGGCTGATCTTCGTCGCCTGCCATCCGCTGTTGTCGATGGAGGCGCGCGTGGCGCTGACCCTGCGCCTGCTCGGTGGCCTCAGCACCGAGGAGATTGCGCGCGCCTTCCTGATTCCAGAACCGACCATCGCGCAGCGCATCGTGCGGGCCAAGCGCAGCCTGGCCAAGGCCGAGGTGGCCTACGAGGTGCCACGGGGCGACGAACTGCACGAACGCCTTTCCGCCGTGCTCGGGGTGATCTACCTGATCTTCAATGAGGGCTATTCGGCCACCACCGGCGATGACTGGATGCGACCCGCCTTGTGTGAGGACGCGTTGCGGCTGGGGCGCGTGCTGACCGGCCTGATGCCGCGCGAAGCCGAGGTGTACGGGCTGCTCGCGCTGATGGAAATCCAGGCGTCGCGCTCCGCCGCGCGGGTGGATGCGCAGGGCGAACCGATCCTGCTGCTCGAACAGGATCGCCGCCTGTGGGATCACCTGCAGATCCGCCGCGGACTGGCTGCGCTGGAGCAGGCCGGCAGGCTGGGCGGGGCCGATGGCCCGTACGCACTGCAGGCGGCGATTGCCGCCTGTCATGCGCGCGCCCCGACCAGCGAGGAGACGGACTGGGATGGCATCGCCGGCCTGTACGCGACGCTGGCCGAGGTGGCGCCTTCGCCCATCGTCGAGCTCAACCGGGCGGTGGCGGTGGGCATGGCGGCGGGCGCCGCCGCCGGGTTGGCGCTGGCGGACGGGCTGGTCGCCGAGCCGAGCCTGCAGAAGTACCACCTGCTGCAGGCCGTGCGTGGCGATCTGCTGGGGCGCCTGGGCCGTCGCCACGAGGCGCGGGAAGCGTTCGAGCAGGCAGCTGCGCTGACCATGAACCGGCGCGAACGCGAGCTGATGCTTGGCCGCGCCCGCCAGTATGCAGACGAGCCGCCGCCGTGA
PROTEIN sequence
Length: 425
MSQTDTHRAIDTVWRSESARLIAGLTRMLRDVGLAEELAQDALVTALEQWPRSGVPENPGAWLMTTAKHRAIDRLRRSKLLERKHAQLVHELEHEQEHAHAAVEAALDDPFGDDLLRLIFVACHPLLSMEARVALTLRLLGGLSTEEIARAFLIPEPTIAQRIVRAKRSLAKAEVAYEVPRGDELHERLSAVLGVIYLIFNEGYSATTGDDWMRPALCEDALRLGRVLTGLMPREAEVYGLLALMEIQASRSAARVDAQGEPILLLEQDRRLWDHLQIRRGLAALEQAGRLGGADGPYALQAAIAACHARAPTSEETDWDGIAGLYATLAEVAPSPIVELNRAVAVGMAAGAAAGLALADGLVAEPSLQKYHLLQAVRGDLLGRLGRRHEAREAFEQAAALTMNRRERELMLGRARQYADEPPP*