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scnpilot_solids1_trim150_scaffold_664

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_664_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..329)
DNA (327bp) protein (109aa)
Glutaryl-CoA dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W610_9GAMM
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:EIL94901.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acyl-CoA dehydrogenase
scnpilot_solids1_trim150_scaffold_664_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

451..1326
DNA (876bp) protein (292aa)
Drug-metabolite transporter superfamily protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W609_9GAMM rbh
Drug-metabolite transporter superfamily protein {ECO:0000313|EMBL:EIL94900.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
EamA-like transporter family
scnpilot_solids1_trim150_scaffold_664_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1340..2311)
DNA (972bp) protein (324aa)
Putative transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W608_9GAMM rbh
Putative transcriptional regulator {ECO:0000313|EMBL:EIL94899.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative transcriptional regulator rbh
scnpilot_solids1_trim150_scaffold_664_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2396..3250
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W607_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94898.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_664_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3247..3888
DNA (642bp) protein (214aa)
Lysine exporter protein LysE/YggA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W606_9GAMM rbh
Lysine exporter protein LysE/YggA {ECO:0000313|EMBL:EIL94897.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
homoserine/threonine efflux protein
scnpilot_solids1_trim150_scaffold_664_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3897..4826)
DNA (930bp) protein (310aa)
5'-nucleotidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W605_9GAMM rbh
5'-nucleotidase {ECO:0000313|EMBL:EIL94896.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
5'-nucleotidase
scnpilot_solids1_trim150_scaffold_664_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4900..5661)
DNA (762bp) protein (254aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W604_9GAMM rbh
putative sugar kinase rbh
scnpilot_solids1_trim150_scaffold_664_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6053..8215)
DNA (2163bp) protein (721aa)
NAD-specific glutamate dehydrogenase (EC:1.4.1.2)
NAD-glutamate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W603_9GAMM
NAD-glutamate dehydrogenase {ECO:0000313|EMBL:EIL94894.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_664_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8199..10883)
DNA (2685bp) protein (895aa)
NAD-specific glutamate dehydrogenase (EC:1.4.1.2)
NAD-glutamate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W603_9GAMM
NAD-glutamate dehydrogenase {ECO:0000313|EMBL:EIL94894.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_664_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11412..12590
DNA (1179bp) protein (393aa)
Membrane fusion protein of RND family multidrug efflux pump n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W602_9GAMM rbh
Membrane fusion protein of RND family multidrug efflux pump {ECO:0000313|EMBL:EIL94893.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RND family efflux transporter, MFP subunit
scnpilot_solids1_trim150_scaffold_664_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12603..15779
DNA (3177bp) protein (1059aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W601_9GAMM rbh
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter {ECO:0000313|EMBL:EIL94892.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
scnpilot_solids1_trim150_scaffold_664_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15943..17103)
DNA (1161bp) protein (387aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W600_9GAMM rbh
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:EIL94891.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acyl-CoA dehydrogenase
scnpilot_solids1_trim150_scaffold_664_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17258..18187
DNA (930bp) protein (310aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Z9_9GAMM rbh
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EIL94890.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
methylase involved in ubiquinone/menaquinone biosynthesis
scnpilot_solids1_trim150_scaffold_664_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18205..19281
DNA (1077bp) protein (359aa)
Cobalamin-dependent methionine synthase I n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Z8_9GAMM rbh
Cobalamin-dependent methionine synthase I {ECO:0000313|EMBL:EIL94889.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cobalamin-dependent methionine synthase I
scnpilot_solids1_trim150_scaffold_664_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19427..22135
DNA (2709bp) protein (903aa)
methionine synthase (B12-dependent) (EC:2.1.1.13)
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Z7_9GAMM rbh
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:EIL94888.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_664_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22137..22478)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Z6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94887.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_664_trna_1
unknown

Not on your lists

22615..22686
DNA (72bp)
transferRNA Val
scnpilot_solids1_trim150_scaffold_664_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22917..23624
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Z5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94886.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_664_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23635..25722
DNA (2088bp) protein (696aa)
Putative transmembrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Z4_9GAMM rbh
Putative transmembrane protein {ECO:0000313|EMBL:EIL94885.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative transmembrane protein rbh
scnpilot_solids1_trim150_scaffold_664_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25719..26357
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Z3_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94884.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_664_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26380..26988
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Z2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94883.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_664_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27010..30732)
DNA (3723bp) protein (1241aa)
GAF sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Z1_9GAMM rbh
GAF sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EIL94882.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
diguanylate cyclase (GGDEF) domain-containing protein
scnpilot_solids1_trim150_scaffold_664_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30854..32128)
DNA (1275bp) protein (425aa)
ECF subfamily RNA polymerase sigma factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Z0_9GAMM rbh
ECF subfamily RNA polymerase sigma factor {ECO:0000313|EMBL:EIL94881.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RNA polymerase, sigma subunit, ECF family
scnpilot_solids1_trim150_scaffold_664_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32415..32927)
DNA (513bp) protein (171aa)
Putative prepilin like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Y9_9GAMM
Putative prepilin like protein {ECO:0000313|EMBL:EIL94880.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
scnpilot_solids1_trim150_scaffold_664_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32939..36784)
DNA (3846bp) protein (1282aa)
Putative type 4 fimbrial biogenesis protein PilY1 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Y8_9GAMM rbh
Putative type 4 fimbrial biogenesis protein PilY1 {ECO:0000313|EMBL:EIL94879.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Tfp pilus assembly protein, tip-associated adhesin PilY1
scnpilot_solids1_trim150_scaffold_664_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36852..37439)
DNA (588bp) protein (196aa)
Putative Tfp pilus assembly protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Y7_9GAMM rbh
Putative Tfp pilus assembly protein {ECO:0000313|EMBL:EIL94878.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Tfp pilus assembly protein PilX
scnpilot_solids1_trim150_scaffold_664_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37441..38460)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Y6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94877.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
scnpilot_solids1_trim150_scaffold_664_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38457..38978)
DNA (522bp) protein (174aa)
Type IV pilus modification protein PilV n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Y5_9GAMM rbh
Type IV pilus modification protein PilV {ECO:0000313|EMBL:EIL94876.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
type IV pilus modification protein PilV
scnpilot_solids1_trim150_scaffold_664_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38981..39571)
DNA (591bp) protein (197aa)
Tfp pilus assembly protein FimT-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Y4_9GAMM rbh
Tfp pilus assembly protein FimT-like protein {ECO:0000313|EMBL:EIL94875.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
scnpilot_solids1_trim150_scaffold_664_trna_2
unknown

Not on your lists

comp(39762..39834)
DNA (73bp)
transferRNA Thr
Displaying items 1-30 of 36 in total

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