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scnpilot_solids1_trim150_scaffold_870_1

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 10 / 38
Location: 2..244

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 80.0
  • Bit_score: 164
  • Evalue 1.70e-38
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 80.0
  • Bit_score: 164
  • Evalue 7.50e-38
DNA-directed RNA polymerase subunit alpha n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNL2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 80.0
  • Bit_score: 164
  • Evalue 5.40e-38

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Taxonomy

Luteibacter yeojuensis → Luteibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 243
CTGCGCCCGATCGACGATCTGGAGCTGACCGTGCGTTCGGCGAACTGCCTGAAGGCCGAGAGCATCTACTACATCGGCGACCTGGTGCAGAAGACCGAAGTCGAGCTGCTGAAGACGCCGAACCTGGGCAAGAAGTCGCTGACGGAAATCAAGGACGTGCTGGGCGGGCGTGGGCTCGCGCTGGGCATGAAGCTCGAGAACTGGCCGCCGCCGGGTCTGTCGCACGGCATGCAGTTGGGTTGA
PROTEIN sequence
Length: 81
LRPIDDLELTVRSANCLKAESIYYIGDLVQKTEVELLKTPNLGKKSLTEIKDVLGGRGLALGMKLENWPPPGLSHGMQLG*