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scnpilot_solids1_trim150_scaffold_19734_5

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 10 / 38
Location: comp(2114..3049)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 215.0
  • Bit_score: 413
  • Evalue 3.60e-112
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 215.0
  • Bit_score: 412
  • Evalue 1.40e-112
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WXG7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 215.0
  • Bit_score: 413
  • Evalue 1.50e-112

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGCAGACGGCAACTTCCCGGGACGCACCTCACGGTGTACGTCAAGTCGAGATCGGCCCGGAGCGCGACGGGCAGCGCATCGACAACGCCCTGGTGACCCTGCTCAAGGGCGTACCCAAGAGCATGATTTACCGACTGTTGCGCACCGGACAGGTGCGCGTGAACGGGAAACGGGCCAAACCCGATACGCGTCTCGCCAACGGTGATACGCTCATCGACAAGCCGGCCGGCGTGGCCAGCCACGGCGGCAGCGGGATCAGCCATGGGGCGATCGAGCTGCTGCGCGCGGCGCGTCCGCAGGAACACCTGGAGCTGGTGCACCGGCTCGACCGCGATACCAGCGGCGTGCTGGTGTTTGCCCGTACCCGGGCGGGATTGACCGGGCTGCAGGCGGCGATCCGGGCCGGCGAGGTTACCAAGCAGTACCTGTGTTTGATGCTGGGGCACCCGGCCAAGGCCAGGTTCGACGTCAATGCGCCGCTGCTGAAGTCGATCATGCAGGGCGGCGAGCGCATGGTGCGGGTGGCCGAGAGCGGCAAGCCGTCGTTGACTTTCTTCCGCGAAATGGAGCAGTACCCCAGCGCGCGCCTGATGCAGGCCACCCTGGGAACCGGCCGCACCCACCAGATTCGCGTGCATGCAGCGCACATCGGCCATCCGCTGGCTGGCGACCCGAAGTACGGCGATCGCGAGATGAACAAGCGCTACCGCGAGATGGGGCTGCACCGGATGTTCCTGCATGCGGCCCACCTGAGCTTCGACCTGGATGGGCGCTCCTACAGTTTCTCGGCTCCGCTGCCGGCGGACCTGAAGGATTTCCTCGACACGCTTGCCGTCAAGGGCAAGCGGCTGGTCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCAGGGTGCGGTGGAAATCCTCGAACTTGA
PROTEIN sequence
Length: 312
MQTATSRDAPHGVRQVEIGPERDGQRIDNALVTLLKGVPKSMIYRLLRTGQVRVNGKRAKPDTRLANGDTLIDKPAGVASHGGSGISHGAIELLRAARPQEHLELVHRLDRDTSGVLVFARTRAGLTGLQAAIRAGEVTKQYLCLMLGHPAKARFDVNAPLLKSIMQGGERMVRVAESGKPSLTFFREMEQYPSARLMQATLGTGRTHQIRVHAAHIGHPLAGDPKYGDREMNKRYREMGLHRMFLHAAHLSFDLDGRSYSFSAPLPADLKDFLDTLAVKGKRLVXXXXXXXXXXXXXXXXXPGCGGNPRT*