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scnpilot_solids1_trim150_scaffold_19734

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_19734_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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439..747
DNA (309bp) protein (103aa)
Cytochrome c553 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSP1_9GAMM
cytochrome c553
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_19734_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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766..1119
DNA (354bp) protein (118aa)
Cytochrome c, class I n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6T6_9GAMM
Cytochrome c, class I {ECO:0000313|EMBL:EIL95177.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytochrome c553
scnpilot_solids1_trim150_scaffold_19734_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1193..1801)
DNA (609bp) protein (203aa)
Fe/S biogenesis protein NfuA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI72_9GAMM
Fe/S biogenesis protein NfuA {ECO:0000256|HAMAP-Rule:MF_01637, ECO:0000256|SAAS:SAAS00035357}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
thioredoxin-like protein
scnpilot_solids1_trim150_scaffold_19734_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1969..2214
DNA (246bp) protein (82aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
pterin-4a-carbinolamine dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6T4_9GAMM
scnpilot_solids1_trim150_scaffold_19734_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2114..3049)
DNA (936bp) protein (312aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WXG7_9GAMM
scnpilot_solids1_trim150_scaffold_19734_6

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3346..3438
DNA (93bp) protein (31aa)
Ribonuclease E n=1 Tax=Rhodanobacter denitrificans RepID=I4WXG6_9GAMM
ribonuclease, Rne/Rng family
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:EQD66747.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Displaying 6 items

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