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scnpilot_solids1_trim150_scaffold_10169_3

Organism: SCNPILOT_SOLID_1_TRIM150_Brevundimonas_68_22

near complete RP 43 / 55 MC: 1 BSCG 44 / 51 MC: 1 ASCG 6 / 38 MC: 2
Location: 1245..2147

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYG4_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 300.0
  • Bit_score: 584
  • Evalue 4.70e-164
  • rbh
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:EGF95852.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 300.0
  • Bit_score: 584
  • Evalue 6.70e-164
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 290.0
  • Bit_score: 364
  • Evalue 4.10e-98
  • rbh

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGTCGCGGCCTGATCCCGTCACCGAGACCTTCGAGACGCATCGGCCGCGACTGACGCGCCTGGCCTATCGAATGCTCGGCTCCCTGGCCGAGGCCGAGGACGTGGCGCAGGACGCCTGGCTGCGGTGGAGCCGCATCAACCCGGCCGAAATCCGCGAACCCGGCGCCTGGCTGACGCGCACCGCGACCCGCCTGGCGCTGGACCGGCTGAAGTCCGCCCGGATGCAGCGCGAGACCTATGTCGGCGCCTGGCTGCCCGAGCCCCTGATCACCGAGCCTGCGTCAGGCGTCGAGGAATTCGCCGATGACCTGACCCTGTCGCTGATGACGGCGATGGAGCGTCTGTCGCCGCTGGAGCGCGCGGCCTTTCTGCTGCACGACGTCTTCGATGTCGGCTTTGACGAGGTGGCGACGACCCTTGAGCGCGACCCTGTTTCCGTCCGGCAGCTGGCCAGCCGCGCACGTCGCCATATCCAGGCCGCCCGCCCCCGCTACGCCGTCGAACCCGAGGAGGGCGAGCGTCTCGCCCGCGCCTTCTTCGAGGCGGCGAAAACCGGCGACACCGCCGCGCTCGGCGCCCTTCTGGCGGACGAGGCGACGCTGAGATCAGACGGCGGCGGCAAGGTCATCGCCTTCCACAACGCCATCCACGGCGCGCCGAAACTGCTGCGCCTCTATGCCGGGCTACATCGCAAATACGGTCACGAGGGCTCTGAAATGGTCCGGCCGCTGTGGATCGACGGCCTGCCCGGCTATGTCAGCCTGGAACGCGGGCGGATTCTACAAACCACGGCGCTGAACATCGCTCAGGGGCGGATCGTCGAAGTCTTCATCACCCGCAACCCGGACAAGCTGGCGCGCATCGCCGCCCTGTTGGACGCGTCGCCGCTCGCCTCGACCTAG
PROTEIN sequence
Length: 301
MSRPDPVTETFETHRPRLTRLAYRMLGSLAEAEDVAQDAWLRWSRINPAEIREPGAWLTRTATRLALDRLKSARMQRETYVGAWLPEPLITEPASGVEEFADDLTLSLMTAMERLSPLERAAFLLHDVFDVGFDEVATTLERDPVSVRQLASRARRHIQAARPRYAVEPEEGERLARAFFEAAKTGDTAALGALLADEATLRSDGGGKVIAFHNAIHGAPKLLRLYAGLHRKYGHEGSEMVRPLWIDGLPGYVSLERGRILQTTALNIAQGRIVEVFITRNPDKLARIAALLDASPLAST*