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scnpilot_solids1_trim150_scaffold_10169

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_10169_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..715
DNA (714bp) protein (238aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Succinyl-diaminopimelate desuccinylase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYG2_BREDI rbh
scnpilot_solids1_trim150_scaffold_10169_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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794..1240
DNA (447bp) protein (149aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Alkylhydroperoxidase AhpD family core domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYG3_BREDI
AhpD family alkylhydroperoxidase-like protein
scnpilot_solids1_trim150_scaffold_10169_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1245..2147
DNA (903bp) protein (301aa)
RNA polymerase sigma factor, sigma-70 family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYG4_BREDI rbh
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:EGF95852.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
scnpilot_solids1_trim150_scaffold_10169_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2144..2362)
DNA (219bp) protein (73aa)
YbaK / prolyl-tRNA synthetase associated domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYG5_BREDI
YbaK / prolyl-tRNA synthetase associated domain protein {ECO:0000313|EMBL:EGF95853.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
YbaK/prolyl-tRNA synthetase associated domain-containing protein
scnpilot_solids1_trim150_scaffold_10169_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2572..2787)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYG6_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95854.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_10169_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2789..3130)
DNA (342bp) protein (114aa)
Endoribonuclease L-PSP family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYG7_BREDI
Endoribonuclease L-PSP family protein {ECO:0000313|EMBL:EGF95855.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
endoribonuclease L-PSP
scnpilot_solids1_trim150_scaffold_10169_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3246..3680
DNA (435bp) protein (145aa)
Polyketide cyclase / dehydrase and lipid transport family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYG8_BREDI
Polyketide cyclase / dehydrase and lipid transport family protein {ECO:0000313|EMBL:EGF95856.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
polyketide cyclase/dehydrase
scnpilot_solids1_trim150_scaffold_10169_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3695..4687)
DNA (993bp) protein (331aa)
Bacterial type II secretion system protein F domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYG9_BREDI rbh
Bacterial type II secretion system protein F domain protein {ECO:0000313|EMBL:EGF95857.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
type II secretion system F domain-containing protein; K12511 tight adherence protein C rbh
scnpilot_solids1_trim150_scaffold_10169_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4704..5588)
DNA (885bp) protein (295aa)
Bacterial type II secretion system protein F domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYH0_BREDI rbh
Bacterial type II secretion system protein F domain protein {ECO:0000313|EMBL:EGF95858.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
type II secretion system F domain-containing protein; K12510 tight adherence protein B rbh
scnpilot_solids1_trim150_scaffold_10169_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5594..5992)
DNA (399bp) protein (133aa)
CpaF n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYH1_BREDI
CpaF {ECO:0000313|EMBL:EGF95859.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
type II secretion system protein E; K02283 pilus assembly protein CpaF
Displaying 10 items

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