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scnpilot_solids1_trim150_scaffold_10169_10

Organism: SCNPILOT_SOLID_1_TRIM150_Brevundimonas_68_22

near complete RP 43 / 55 MC: 1 BSCG 44 / 51 MC: 1 ASCG 6 / 38 MC: 2
Location: comp(5594..5992)

Top 3 Functional Annotations

Value Algorithm Source
CpaF n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYH1_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 132.0
  • Bit_score: 262
  • Evalue 1.80e-67
CpaF {ECO:0000313|EMBL:EGF95859.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 132.0
  • Bit_score: 262
  • Evalue 2.60e-67
type II secretion system protein E; K02283 pilus assembly protein CpaF similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 132.0
  • Bit_score: 257
  • Evalue 2.40e-66

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 399
ATGAACACCGGCCACGACGGCTCGATGGGGACGCTGCACGCCAACTCCCCGCGCGAAGCCATCAGCCGGATGGAATCGATGATCACCATGGGCGGCTACGGCCTGCCGTCCAAGACGATCCGCGAGATGATCGTCGGCTCGATCGACGTCATCGTCCAGGCCGCGCGCCTGCGCGACGGCTCGCGCCGCATCACCCACATCACCGAGGTGGTGGGACTGGAGGGCGACGTCATCGTCACCCAGGATCTGTTCGTCTACGACATCACCGGCGAGGACGCGAACGGCAAGATCACCGGCCGCCACCGCTCGACCGGCATCGCGCGCCCGCGTTTCTGGGATCGCGCCCGCTATTATGGGCTGGAGCGGGAACTGGCCGAAGCCCTGGACGCGGCGGAGTAG
PROTEIN sequence
Length: 133
MNTGHDGSMGTLHANSPREAISRMESMITMGGYGLPSKTIREMIVGSIDVIVQAARLRDGSRRITHITEVVGLEGDVIVTQDLFVYDITGEDANGKITGRHRSTGIARPRFWDRARYYGLERELAEALDAAE*